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Name : CLL_A1424 (CLL_A1424) Accession : YP_001885620.1 Strain : Clostridium botulinum Eklund 17B Genome accession: NC_010674 Putative virulence/resistance : Unknown Product : glycine betaine/carnitine/choline transport ATP-binding protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1125 EC number : 3.6.3.25 Position : 1469198 - 1469929 bp Length : 732 bp Strand : + Note : identified by match to protein family HMM PF00005 DNA sequence : ATGACTAGAAGAAGAATTATAGAATTTGAAGGTATATGCAAATCATATGAAAATAAGGAAATATTAAAAAATTTAAATTT ATGCATAGATAAGGGGGAGTTTTTAACTATAATAGGAAGTTCAGGCTGTGGAAAGACAACGTTACTTAAGCTAGTTAATG GTTTGATAATGCCAGATAAAGGGAGAGTATTAGTTTATGGAGAGGATATATCAAAGATTAGTAAAATTGAATTAAGAAGA AAGATTGGCTATGTTATTCAGGAGGTTGGATTATTTCCACATATGAATGTAAGAAAAAATATATCCTATGTACTAGATTT AATAAATAAGGACAATAAAAGAAGCATACAAGAAAGAACTGAATATTTGATAAAATCAGTAGGTCTTAGCAAAGAAATCT TAAATAGTTATCCAGGAGAACTTTCTGGAGGACAGCGTCAGCGTATTGGTATTGCAAGAGCTCTAGCAGCTAAGCCTAAT ATAGTATTAATGGATGAACCATTTGGAGCAGTGGATGAAATAACAAGAAAACTTTTACAGGAGGAAATTTTACGAATCTA TAATGAGTTTAATGTAACAATTATCTTCATAACTCATGATATTCGGGAGGCTTTAAAGCTTGGGACAAGGGTAATTGTAA TGGATGAAGGTAATATAATACAATCTGGAACTCCAACAGAAATAAGAGAAAATCCAAAAACTATTTTTGTAAAAGAGCTC ATTGGAGCATAA Protein sequence : MTRRRIIEFEGICKSYENKEILKNLNLCIDKGEFLTIIGSSGCGKTTLLKLVNGLIMPDKGRVLVYGEDISKISKIELRR KIGYVIQEVGLFPHMNVRKNISYVLDLINKDNKRSIQERTEYLIKSVGLSKEILNSYPGELSGGQRQRIGIARALAAKPN IVLMDEPFGAVDEITRKLLQEEILRIYNEFNVTIIFITHDIREALKLGTRVIVMDEGNIIQSGTPTEIRENPKTIFVKEL IGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 1e-46 | 44 |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 1e-46 | 44 |
