|
Name : rplS (CLL_A1250) Accession : YP_001885448.1 Strain : Clostridium botulinum Eklund 17B Genome accession: NC_010674 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 1278471 - 1278821 bp Length : 351 bp Strand : + Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site DNA sequence : ATGAACGAAATAATAAGAGCTATTGAAGCTGAACAATTAAGAACTGACCTACCAGACTTTAAAATTGGTGACAATGTAAA AGTTTATGTTAAGGTTACAGAAGGTACAAGAGAAAGAGTACAAATGTTTGAAGGTACTGTAATTAAGAAACAAAACGGTG GATTAAGAGAAACTTTCACTGTAAGAAGAGTTGCTTATGGATGCGGTGTTGAAAGAACATTCCCAATGCATGCACCAATA ATCGAAAAGATTGAAATCTCAAGAAGAGGTAAAGTAAGAAGAGCTAAACTTTACTACCTAAGAGATAGAGTTGGTAAGGC TGCAAAGGTTAAAGAATTATTAACTAGATAA Protein sequence : MNEIIRAIEAEQLRTDLPDFKIGDNVKVYVKVTEGTRERVQMFEGTVIKKQNGGLRETFTVRRVAYGCGVERTFPMHAPI IEKIEISRRGKVRRAKLYYLRDRVGKAAKVKELLTR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 6e-31 | 60 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 3e-28 | 54 |
