Gene Information

Name : CLL_A1195 (CLL_A1195)
Accession : YP_001885393.1
Strain : Clostridium botulinum Eklund 17B
Genome accession: NC_010674
Putative virulence/resistance : Virulence
Product : alkaline phosphatase synthesis transcriptional regulatory proteinphoP
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1223069 - 1223773 bp
Length : 705 bp
Strand : +
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence :
ATGTCTGATGAAAAAATATTAATAGTGGATGATGAGGAACACATAATAGAATTATTAAAGTTTAATTTGGTTAATGCAGG
GTATAAAGTGCTTTCTTCCAACAATGGTATAGATGCGCTTAAAATAGCTAAAATGGAAAACCCTAAATTGATATTATTGG
ATTTAATGTTACCAGGATTAGATGGTTTTGATGTTTGTAAAGAAGTAAAAAAAGATAAAGAAACTCAAAATATATCAATA
ATAATGTTGACAGCAAAAGGAGAAGAAATTGATAAAATATTAGGTTTAGAATTAGGTGCAGATGATTATATAACTAAACC
TTTTTCTGTGAGAGAATTATTAGCAAGAGTTAAAGCTGTTCTTAGAAGAACTTATCCAGGTGCAGATATTGAAAATAATT
CATATGAGTCTAAAGGTCTTAAAATAGATTTTGATAGACATGAGGTGTTTATTAATAATCAAAAAGTTGAATTAACTTTA
AAAGAATTTGATCTTTTAAAAATATTAATAAAAAACAAAGGGAAAATCCTTCAAAGAGAAACACTATTAGATAAAATATG
GGGATATGAGTACATAGGAGAAACTAGAACAGTAGATGTACATATAAGATATTTAAGAAAGAAAATAGAAGAAGACGATA
AAAATCCTAAATTTATAGAAACGATTAGAGGAGTAGGTTATAGATTTAACCCAATTGATAAATAA

Protein sequence :
MSDEKILIVDDEEHIIELLKFNLVNAGYKVLSSNNGIDALKIAKMENPKLILLDLMLPGLDGFDVCKEVKKDKETQNISI
IMLTAKGEEIDKILGLELGADDYITKPFSVRELLARVKAVLRRTYPGADIENNSYESKGLKIDFDRHEVFINNQKVELTL
KEFDLLKILIKNKGKILQRETLLDKIWGYEYIGETRTVDVHIRYLRKKIEEDDKNPKFIETIRGVGYRFNPIDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 8e-21 41
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 5e-20 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP HE999704.1.gene2815. Protein 5e-41 51
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_012469.1.7686381. Protein 4e-39 50
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_002952.2859905.p0 Protein 4e-41 49
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_002745.1124361.p0 Protein 3e-41 49
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_009782.5559369.p0 Protein 3e-41 49
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_002951.3237708.p0 Protein 3e-41 49
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_007622.3794472.p0 Protein 4e-41 49
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_002758.1121668.p0 Protein 3e-41 49
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_009641.5332272.p0 Protein 3e-41 49
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_013450.8614421.p0 Protein 3e-41 49
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_007793.3914279.p0 Protein 3e-41 49
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_003923.1003749.p0 Protein 3e-41 49
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP DQ212986.1.gene4.p01 Protein 1e-29 47
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_012469.1.7685629. Protein 4e-37 47
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP AE016830.1.gene1681. Protein 4e-39 47
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP AM180355.1.gene1830. Protein 3e-29 45
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP CP001138.1.gene2239. Protein 4e-25 44
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP CP000034.1.gene2186. Protein 3e-25 44
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_002695.1.916589.p Protein 2e-25 44
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP BAC0596 Protein 4e-25 44
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP BAC0039 Protein 3e-25 44
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_007793.3914065.p0 Protein 6e-29 43
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_002758.1121390.p0 Protein 6e-29 43
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_010079.5776364.p0 Protein 6e-29 43
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_002952.2859858.p0 Protein 6e-29 43
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_007622.3794948.p0 Protein 6e-29 43
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP AE015929.1.gene1106. Protein 5e-25 43
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_003923.1003417.p0 Protein 6e-29 43
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_013450.8614146.p0 Protein 6e-29 43
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_002951.3238224.p0 Protein 6e-29 43
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_014475.1.orf0.gen Protein 6e-31 43
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP NC_005054.2598277.p0 Protein 6e-31 43
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP CP004022.1.gene1676. Protein 6e-23 43
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP CP001918.1.gene3444. Protein 6e-24 43
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP CP000647.1.gene2531. Protein 1e-24 43
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP FJ349556.1.orf0.gene Protein 9e-31 42
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP AF130997.1.orf0.gene Protein 2e-25 42
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP CP000034.1.gene3671. Protein 1e-31 42
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP AF155139.2.orf0.gene Protein 8e-31 41
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP HE999704.1.gene1528. Protein 4e-24 41
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP EU250284.1.orf4.gene Protein 5e-26 41
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP AF162694.1.orf4.gene Protein 2e-26 41
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP AE000516.2.gene3505. Protein 2e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLL_A1195 YP_001885393.1 alkaline phosphatase synthesis transcriptional regulatory proteinphoP VFG0596 Protein 3e-21 41