Gene Information

Name : SbBS512_A0063 (SbBS512_A0063)
Accession : YP_001883116.1
Strain :
Genome accession: NC_010660
Putative virulence/resistance : Unknown
Product : IS66 family element, orf1
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 37662 - 38081 bp
Length : 420 bp
Strand : +
Note : identified by match to protein family HMM PF01527

DNA sequence : 
ATGGAACAGAAAGCATTATCTGCAGAATCCCGCAGATCATTTTCAAATGAGTTTAAACTTCAAATGGTTAAACTGGCTTC
ACAACCAGGAGCCTCTGTTGCCCGTATTGCCCGGGAACACGATATCAATGATAACCTGCTGTTCAAATGGCTCAGGCTCT
GGCAGAACGAAGGGCGCATATCGCGGCGTCTTCCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAG
ATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTTATCTACTCAGACTACAGTTAGTGCCAGCTC
CTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCACCAGAGCTGCTCACAGTGTTGATCCGTGAAC
TGACCGGGAGGGGACGATGA

Protein sequence : 
MEQKALSAESRRSFSNEFKLQMVKLASQPGASVARIAREHDINDNLLFKWLRLWQNEGRISRRLPVTTSSDTGVELLPVE
ITPDEPKEPVAALTPSLSTQTTVSASSCKVEFRHGNMTLENPSPELLTVLIRELTGRGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1598 NP_287102.1 hypothetical protein Not tested TAI Protein 2e-54 91
Z1159 NP_286694.1 hypothetical protein Not tested TAI Protein 2e-54 91
unnamed CAD66191.1 hypothetical protein Not tested PAI III 536 Protein 3e-51 87
Z1648 NP_287151.1 hypothetical protein Not tested TAI Protein 3e-51 86
Z1208 NP_286743.1 hypothetical protein Not tested TAI Protein 2e-51 86
ECO103_3566 YP_003223429.1 hypothetical protein Not tested LEE Protein 2e-48 80
unnamed CAD66197.1 hypothetical protein Not tested PAI III 536 Protein 9e-41 80
ECUMN_3365 YP_002414038.1 putative transposase Not tested Not named Protein 3e-32 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SbBS512_A0063 YP_001883116.1 IS66 family element, orf1 VFG1666 Protein 1e-51 87
SbBS512_A0063 YP_001883116.1 IS66 family element, orf1 VFG1672 Protein 4e-41 80
SbBS512_A0063 YP_001883116.1 IS66 family element, orf1 VFG1738 Protein 7e-33 57