Gene Information

Name : SbBS512_A0059 (SbBS512_A0059)
Accession : -
Strain :
Genome accession: NC_010660
Putative virulence/resistance : Unknown
Product : -
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 35803 - 36471 bp
Length : 669 bp
Strand : -
Note : IS629 transposase orfB; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00665

DNA sequence :
TTGTTACGGGAAGGTATCAGAGTGGCCAGATGCACTGTGGCACGTCTCATGGCGGTTATGGGACTTGCCGGTGTTCTCCG
GGGTAAAAAGGTCCGTACGACCATCAGCCGGAAAGCCGTTGCCGCAGGCGACCGCGTAAACCGTCAGTTCGTGGCAGAAC
GACCTGACCAGCTGTGGGTAGCTGATTTTACTTACGTCAGCACATGGCAGGGCTTCGTCTATGTGGCGTTCATCATTGAT
GTGTTTGCCGGATACATTGTGGGGTGGCGGGTCTCATCGTCCATGGAGACGACATTCGTGCTGGATGCACTGGAGCAGGC
GTTATGGGCCCGTCGACCGTCCGGCACGGTCCATCACAGTGATAAAGGTTCTCAGTATGTATCGCTGGCCTACACACAGC
GGCTTAAGGAAGCCGGATTACTGGCATCAACAGGAAGTACAGGCGACTCGTATGACAACGCGATGGCGGAGAGCATCAAT
GGTCTTTACAAAGCGGAGGTAATACACCGTAAGAGCTGGAAAAACCGTGCAGAAGTGGAACTGGCCACACTCACGTGGGT
GGACTGGTATAACAATCGACGATTGCTGGAAAGGCTGGGCCATACTCCTCCGGCAGAAGCAGAAAAAGCTTATTATGCTT
CCATCGGAAACGATGATCTGGCAGCCTGA

Protein sequence :
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 DNA 0.0 99.4
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 DNA 0.0 99.1
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 DNA 0.0 99.1
tnpC AAD44736.1 TnpC Not tested SHI-2 DNA 0.0 98.7
SF3705 - - Not tested SHI-2 DNA 0.0 98.7
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 DNA 0.0 98.6
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 DNA 0.0 96.4
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 DNA 0.0 95.8
IS629 CAI43821.1 transposase for IS629 Not tested LEE DNA 0.0 95.8
IS629 CAC37926.1 transposase for IS629 Not tested LEE DNA 0.0 95.8
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE DNA 0.0 95.8
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE DNA 0.0 95.7
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE DNA 0.0 95.7
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE DNA 0.0 95.5
unnamed - - Not tested LEE DNA e-277 94.3
ECO103_3568 - - Not tested LEE DNA e-277 94.3
unnamed - - Not tested LEE DNA 0.0 94.2
ECO103_3580 - - Not tested LEE DNA 0.0 94.2
Z1221 NP_286756.1 transposase Not tested TAI DNA 0.0 94
Z1660 NP_287162.1 transposase for IS629 Not tested TAI DNA 0.0 94
Z1198 NP_286733.1 transposase Not tested TAI DNA 0.0 94
Z1638 NP_287141.1 transposase Not tested TAI DNA 0.0 94
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 DNA 0.0 93.9
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 DNA 0.0 93.9
IS629 CAI43840.1 transposase for IS629 Not tested LEE DNA 0.0 93.7
c3594 NP_755469.1 transposase Not tested PAI I CFT073 DNA e-266 93.3
ECUMN_3342 - - Not tested Not named DNA e-266 93.3
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 DNA 0.0 92.7