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Name : SbBS512_A0056 (SbBS512_A0056) Accession : YP_001883112.1 Strain : Genome accession: NC_010660 Putative virulence/resistance : Virulence Product : reverse transcriptase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3344 EC number : - Position : 33883 - 35100 bp Length : 1218 bp Strand : - Note : identified by match to protein family HMM PF00078; match to protein family HMM PF08388 DNA sequence : TTGAAATACCAAAAGCACTGGTCTGGGCATCATATCTGGATGTGCGTCGCAACAAGGGAGCCCCCCGGATGCGACGGGCA GACTTTGAAAATGTTCGACCAGCAACGTGATGGCAATCTATACAAGATCTGGAACCGGCTATGTTCGGGAACATGGTTTC CGCCACCAGTGCTGGAAAAACGGATCCCGAAGTCGAATGGCAAGGAACGCATTCTGGGGATCCCAACAGTATCCGATCGA ATTGCTCAGGGAGCGATAAAACTTTTCATGGAAGAAAAGCTTGACTCGATTTTCCATGCTGATTCATATGGTTACCGACC AGGCAAATCAGCTCATGACGCTCTGAAACAATGTGCCATCCGGTGCTGGCGTTATAGCTGGATACTGGAAGTGGACATCA GTGCGTTTTTCGACCATGTGAAACATGATCTGGTGCTCAAAGCTCTGGAACACCACGGGATGCCTAAATGGGTCATCCTG TACTGTCGACGCTGGATGGAAGCGCCAATGCAGAGTTGTGAAAATGGAGAATTAATAACCCGAACACGAGGCACTCCGCA GGGCGGGGTCATTAGTCCGCTACTTGCTAACTTGTTCCTTCACTATGCATTTGATTTGTGGATGGAAAGAGAATATCGGG GGGTACCGTTTGAGAGGTACGCTGACGATATTGTAGTACATTGTTCACGAATGAGTGATGCAACAAGGCTAAAGAACAGG TTATCGGAGCGCTTCTCGGAAGTCGGGCTGGTCCTGAATGCAGGGAAAACGAATATCGCCTACATTGACACGTTTAAAAG GAGAAACGTCGCAACGAGTTTCACCTTTCTCGGATATGACTTCAAAGTGCGTACGCTGAAGAATTTCAAAGGCGAACGGT ACCGAAAATGCATGCCGGGTGCGTCAAATGCAGCAATGCGCAAAATAACAGAAACAATCAAGAAGTGGCGTATACATCGC TCAACAGCTGAGAGTTTGCTGGATTTTGCGAGGCGCTACAATGCGATAGTGAGAGGCTGGATCGAGTACTACGGAAAGTT CTGGTCCAGAAATTTCAACTATCGACTGTGGAGTGCAATGCAGTCACGTCTGCTCAAGTGGATGCAGTCTAAATACAGAC TTTCGAACCGGAAGGCTCAGCGAAAGCTGACGCTGGTAAGGAAGGAGTATCCGAAGCTATTTGTTCACTGGTATTTACTA CGTGCATCAAATGAGTGA Protein sequence : MKYQKHWSGHHIWMCVATREPPGCDGQTLKMFDQQRDGNLYKIWNRLCSGTWFPPPVLEKRIPKSNGKERILGIPTVSDR IAQGAIKLFMEEKLDSIFHADSYGYRPGKSAHDALKQCAIRCWRYSWILEVDISAFFDHVKHDLVLKALEHHGMPKWVIL YCRRWMEAPMQSCENGELITRTRGTPQGGVISPLLANLFLHYAFDLWMEREYRGVPFERYADDIVVHCSRMSDATRLKNR LSERFSEVGLVLNAGKTNIAYIDTFKRRNVATSFTFLGYDFKVRTLKNFKGERYRKCMPGASNAAMRKITETIKKWRIHR STAESLLDFARRYNAIVRGWIEYYGKFWSRNFNYRLWSAMQSRLLKWMQSKYRLSNRKAQRKLTLVRKEYPKLFVHWYLL RASNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD33771.1 | putative reverse transcriptase | Not tested | PAI I 536 | Protein | 6e-180 | 98 |
| unnamed | ABR13526.1 | reverse transcriptase | Not tested | PAGI-7 | Protein | 6e-82 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SbBS512_A0056 | YP_001883112.1 | reverse transcriptase | VFG1512 | Protein | 3e-180 | 98 |
