Gene Information

Name : SbBS512_A0049 (SbBS512_A0049)
Accession : YP_001883106.1
Strain :
Genome accession: NC_010660
Putative virulence/resistance : Unknown
Product : transposase/IS protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 29166 - 29948 bp
Length : 783 bp
Strand : +
Note : identified by match to protein family HMM PF01695

DNA sequence :
GTGATGATGGAACTGCAACATCAACGACTGATGGCGCTCGCCGGGCAGTTGCAACTGGAAAGCCTTATAAGCGCAGCGCC
TGCGCTGTCACAACAGGCAGTAGACCAGGAATGGAGTTATATGGACTTCCTGGAGCATCTGCTTCATGAAGAAAAACTGG
CACGTCATCAACGTAAACAGGCGATGTATACCCGAATGGCAGCCTTCCCGGCGGTGAAAATGTTCGAAGAGTATGACTTC
ACATTCGCCACCGGAGCACCGCAGAAGCAACTCCAGTCGTTACGCTCACTCAGCCTCATAGAACGTAATGAAAATATCGT
ATTACTGGGGCCATCAGGTGTGGGGAAAACCCATCTGGCAATAGCGATGGGCTATGAAGCAGTCCGTGCAGGTATCCAAG
TTCGCTTCACAACAGCAGCAGATCTGTTACTTCAGTTATCTACGGCACAACGTCAGGGCCGTTATAAAACGACGCTTCAG
CGTGGAGTAATGGCCCCCCGCCTGCTCATCATTGATGAAATAGGCTATCTGCCGTTCAGTCAGAAAGAAGCAAAACTGTT
CTTCCAGGTCATCGCTAAACGTTATGAAAAGAGCGCAATGATCCTGACATCCAATCTACCGTTCGGGCAGTGGGATCAAA
CGTTCGCCGGTGATGCAGCACTGACCTCAGCGATGCTGGGCCGTATCTTACACCACTCACATGTCGTTCAAATCAAAGGA
GAAAGCTATCGACTCAGACAGAAACGAAAGGCCGGGGTTATAGCAGAAGCTAATCCTGAGTAA

Protein sequence :
MMMELQHQRLMALAGQLQLESLISAAPALSQQAVDQEWSYMDFLEHLLHEEKLARHQRKQAMYTRMAAFPAVKMFEEYDF
TFATGAPQKQLQSLRSLSLIERNENIVLLGPSGVGKTHLAIAMGYEAVRAGIQVRFTTAADLLLQLSTAQRQGRYKTTLQ
RGVMAPRLLIIDEIGYLPFSQKEAKLFFQVIAKRYEKSAMILTSNLPFGQWDQTFAGDAALTSAMLGRILHHSHVVQIKG
ESYRLRQKRKAGVIAEANPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 1e-111 99
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 1e-111 99
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 1e-111 99
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 2e-111 99
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 1e-111 99
unnamed CAA21402.1 - Not tested HPI Protein 2e-111 99
api84 CAF28558.1 putative transposase Not tested YAPI Protein 1e-111 99
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 5e-112 99
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 1e-111 99
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 5e-112 99
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 6e-112 98
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 1e-110 98
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 4e-77 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SbBS512_A0049 YP_001883106.1 transposase/IS protein VFG1515 Protein 8e-112 99
SbBS512_A0049 YP_001883106.1 transposase/IS protein VFG1627 Protein 8e-112 99
SbBS512_A0049 YP_001883106.1 transposase/IS protein VFG1606 Protein 8e-112 99
SbBS512_A0049 YP_001883106.1 transposase/IS protein VFG1663 Protein 7e-111 98
SbBS512_A0049 YP_001883106.1 transposase/IS protein VFG1460 Protein 2e-77 98