Gene Information

Name : SbBS512_A0036 (SbBS512_A0036)
Accession : YP_001883097.1
Strain :
Genome accession: NC_010660
Putative virulence/resistance : Unknown
Product : transposase family
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 20358 - 21590 bp
Length : 1233 bp
Strand : +
Note : identified by match to protein family HMM PF03050

DNA sequence :
ATGGACACCTCACTTGCTCATGAGAATGCCCGCCTGCGGGCACTGTTGCAGACGCAACAGGACACCATCCGCCAGATGGC
GAAATACAACCGCCTGCTCTCACAGCGGGTGGCGGCTTATGCTTCCGAAATCAACCGGCTGAAGGCGCTGGTTGCGAAAC
TGCAGCGCATGCAGTTCGGTAAAAGCTCAGAAAAACTTCGCGCAAAAACCGAACGGCAGATACTGGAAGCACAGGAGCGA
ATCAGCGCACTTCAGGAAGAAATGGCGGAAACGCTGGGTGAGCAATATGACCCGGTACTGCCATCTCCCCTGCGCCAGTC
TTCAGCCCGTAAACCGTTACCTGCCTCACTTCCCCGTGAAACCCGGGTCATCCGTCCGGAAGAGGAATGCTGCCCGGCCT
GTGGTGGCGAACTCAGTTCTCTGGGATGTGATGTGTCAGAGCAGCTGGAGCTTATCAGCAGCGCCTTTAAGGTTATCGAA
ACACAACGTCCGAAACTGGCCTGTTGCCGGTGTGACCATATCGTGCAAGCACCGGTGCCTTCAAAACCCATTGCACGCAG
TTATGCCGGAGCGGGGCTTCTGGCCCATGTTGTCGCTGGAAAATATGCAGACTATCTGCCGTTATACCGCCAGTCAGAAA
TATACCGTCGTCAGGGCGTGGAGCTGAGCCGTGCCACACTGGGGCGCTGGACAGGTGCTGTTGCTGAACTGCTGGAACCG
CTGTATGACATCCTGCGCCAGTATGTGCTGATGCCCGGTAAAGTCCATGCCGATGATATCCCCGTTCCGGTCCAGGAGCC
GGGCAGCGGTAAAACAAGGACTGCCCGGCTGTGGGTCTACGTTCGTGATGACCGTAACGCCGGTTCGGAAATGCCTCCGG
CGGTCTGGTTCGCGTACTCACCGGACCGGAAAGGTATCCATCCACAGAATCATCTGGCCGGTTACAGCGGAGTGCTTCAG
GCCGATGCTTACGGTGGTTACCGGGCGTTGTACGAATCCGGCAGAATAACGGAAGCCCTGCTGCGTATCGGTGAACTGTA
TGCCATCGAGGCAGAAGTCCGGGGATGTTCAGCAGAACAGCGTCTGGCGGCAAGAAAAGCCAGAGCCGCGCCACTGATGC
AGTCATTGTATGACTGGATACAGCAACAGATGAAAATTCATTCGCTGAAAATGGAATGTCTCCACGGAGAACACTATTAT
CCATCGGGAAATAGTGCGGGCAACAGTGTTTAG

Protein sequence :
MDTSLAHENARLRALLQTQQDTIRQMAKYNRLLSQRVAAYASEINRLKALVAKLQRMQFGKSSEKLRAKTERQILEAQER
ISALQEEMAETLGEQYDPVLPSPLRQSSARKPLPASLPRETRVIRPEEECCPACGGELSSLGCDVSEQLELISSAFKVIE
TQRPKLACCRCDHIVQAPVPSKPIARSYAGAGLLAHVVAGKYADYLPLYRQSEIYRRQGVELSRATLGRWTGAVAELLEP
LYDILRQYVLMPGKVHADDIPVPVQEPGSGKTRTARLWVYVRDDRNAGSEMPPAVWFAYSPDRKGIHPQNHLAGYSGVLQ
ADAYGGYRALYESGRITEALLRIGELYAIEAEVRGCSAEQRLAARKARAAPLMQSLYDWIQQQMKIHSLKMECLHGEHYY
PSGNSAGNSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 3e-148 92
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 3e-105 88
l0015 CAD33775.1 L0015 protein Not tested PAI I 536 Protein 9e-71 58
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 1e-95 58
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 8e-96 58
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 1e-68 54
tnp AEA34686.1 transposase Not tested Not named Protein 7e-74 54
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 1e-72 53
unnamed AAC31494.1 L0015 Not tested LEE Protein 9e-73 53
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 1e-72 53
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 9e-73 53
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 8e-73 53
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 7e-72 53
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 7e-72 53
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 1e-72 53
unnamed AAL57570.1 unknown Not tested LEE Protein 9e-73 53
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 5e-73 53
unnamed AAL08460.1 unknown Not tested SRL Protein 9e-72 52
tnp AEA34687.1 IS66 family transposase Not tested Not named Protein 7e-61 52
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 9e-60 50
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 2e-69 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SbBS512_A0036 YP_001883097.1 transposase family VFG1513 Protein 1e-105 88
SbBS512_A0036 YP_001883097.1 transposase family VFG1516 Protein 5e-71 58
SbBS512_A0036 YP_001883097.1 transposase family VFG0793 Protein 5e-73 53
SbBS512_A0036 YP_001883097.1 transposase family VFG1051 Protein 5e-72 52
SbBS512_A0036 YP_001883097.1 transposase family VFG1736 Protein 1e-61 50