Gene Information

Name : SbBS512_A0278 (SbBS512_A0278)
Accession : -
Strain :
Genome accession: NC_010660
Putative virulence/resistance : Unknown
Product : -
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 190927 - 191304 bp
Length : 378 bp
Strand : -
Note : IS1 transposase orfB; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF03400

DNA sequence :
ATGGACGAACAGTGGGGATACGTCGGGGCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATAACAGGCTCCGGAAGAC
GGTTGTTGCGCACGTATTCGGTGAACGCACTATGGCGACGCTGGGGCGTCTTATGAGCTTGCTGTCACCCTTTGACGTGG
TGATATGGATGACGGATGGCTGGCCACTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACG
CAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATC
GGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAA

Protein sequence :
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 DNA e-212 99.2
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 DNA e-212 99.2
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 DNA e-212 99.2
insB ADD91744.1 transposase Not tested PAI-I AL862 DNA e-186 94.4
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI DNA e-172 90.9
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI DNA e-172 90.9
aec38 AAW51721.1 InsB Not tested AGI-3 DNA e-143 90.8
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 DNA e-169 90.4
tnpH AAD44742.1 TnpH Not tested SHI-2 DNA e-169 90.4
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 DNA e-168 90.1
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 DNA e-164 89.3