Gene Information

Name : SbBS512_A0226 (SbBS512_A0226)
Accession : YP_001883244.1
Strain :
Genome accession: NC_010660
Putative virulence/resistance : Unknown
Product : IS66 family element, orf1
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 153902 - 154291 bp
Length : 390 bp
Strand : +
Note : identified by match to protein family HMM PF01527

DNA sequence :
GTGTCAGATATGCAGAAAAATGTGAATCCCGGCAGGCGAAAAGGCTGCCCTAATTATCCTCCCGAATTTAAACAGCAGCT
CGTTGCTGCCTCCTGTGAACCCGGGATATCCATCTCAAAACTTGCTCTTGAAAATGGCATTAACGCCAATCTGTTGTTCA
AATGGCGACAACAATGGCGCGAGGGAAAGCTGCTATTACCTTCTTCAGAGAGCCCCCAGCTACTTCCTGTGACTCTCGAT
GCAGCTGCCGAACAGCCAGAATCGCTCGCAGAGGATCCGGAAACCCTCAGTATCAGCTGTGAGGTAACGTTCCGGCACGG
GACGCTCCGCTTCAATGGCAATGTCAGCGAAAAGCTCCTGACTCTGCTGATACAGGAACTGAAGCGATGA

Protein sequence :
MSDMQKNVNPGRRKGCPNYPPEFKQQLVAASCEPGISISKLALENGINANLLFKWRQQWREGKLLLPSSESPQLLPVTLD
AAAEQPESLAEDPETLSISCEVTFRHGTLRFNGNVSEKLLTLLIQELKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
l0013 CAD33777.1 L0013 protein Not tested PAI I 536 Protein 1e-46 99
unnamed AAL99257.1 unknown Not tested LEE Protein 8e-47 99
unnamed ACU09437.1 IS66 family element orf1 Not tested LEE Protein 8e-47 99
unnamed AAC31492.1 L0013 Not tested LEE Protein 7e-48 99
c3577 NP_755452.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-47 99
Z5096 NP_290247.1 prophage-associated protein Not tested LEE Protein 1e-47 99
ECs4545 NP_312572.1 hypothetical protein Not tested LEE Protein 1e-47 99
unnamed AAL08462.1 unknown Not tested SRL Protein 4e-47 98
c3560 NP_755435.1 hypothetical protein Not tested PAI I CFT073 Protein 3e-24 56
ECUMN_3326 YP_002414006.1 putative transposase Not tested Not named Protein 3e-24 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SbBS512_A0226 YP_001883244.1 IS66 family element, orf1 VFG1518 Protein 4e-47 99
SbBS512_A0226 YP_001883244.1 IS66 family element, orf1 VFG1708 Protein 3e-48 99
SbBS512_A0226 YP_001883244.1 IS66 family element, orf1 VFG0791 Protein 3e-48 99
SbBS512_A0226 YP_001883244.1 IS66 family element, orf1 VFG1053 Protein 2e-47 98
SbBS512_A0226 YP_001883244.1 IS66 family element, orf1 VFG1697 Protein 1e-24 56