Gene Information

Name : SbBS512_A0188 (SbBS512_A0188)
Accession : YP_001883217.1
Strain :
Genome accession: NC_010660
Putative virulence/resistance : Virulence
Product : Spa9
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4794
EC number : -
Position : 128634 - 128894 bp
Length : 261 bp
Strand : +
Note : identified by match to protein family HMM PF01313; match to protein family HMM TIGR01403

DNA sequence : 
GTGTCTGATATAGTTTATATGGGTAATAAGGCTCTTTATTTAATCCTTATCTTTTCCTTATGGCCAGTAGGTATAGCTAC
GGTTATTGGATTAACTATTGGTTTATTACAGACAGTGACTCAACTTCAAGAGCAGACACTTCCTTTTGGTATAAAGCTTA
TAGGTGTCTCAATATCTTTGCTACTTCTTTCTGGATGGTATGGTGAGGTTTTATTGTCTTTTTGTCATGAAATAATGTTT
TTAATTAAGAGTGGGGTTTGA

Protein sequence : 
MSDIVYMGNKALYLILIFSLWPVGIATVIGLTIGLLQTVTQLQEQTLPFGIKLIGVSISLLLLSGWYGEVLLSFCHEIMF
LIKSGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spaQ NP_806492.1 virulence-associated secretory protein Virulence SPI-1 Protein 3e-08 70
spaQ NP_461810.1 needle complex export protein Virulence SPI-1 Protein 3e-08 70
spaQ YP_217808.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 3e-08 70
spaQ NP_457283.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 3e-08 70
epaQ AAZ31292.1 EpaQ Virulence ETT2 Protein 2e-04 64
ECs3724 NP_311751.1 EpaQ Not tested LIM Protein 3e-04 64
spaQ AAS66866.1 SpaQ Not tested SSR-2 Protein 3e-06 60
ysaS AAS66847.1 YsaS Not tested SSR-1 Protein 0.014 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SbBS512_A0188 YP_001883217.1 Spa9 VFG1013 Protein 9e-20 99
SbBS512_A0188 YP_001883217.1 Spa9 VFG0550 Protein 7e-09 70
SbBS512_A0188 YP_001883217.1 Spa9 VFG1772 Protein 0.004 55
SbBS512_A0188 YP_001883217.1 Spa9 VFG2454 Protein 0.11 54
SbBS512_A0188 YP_001883217.1 Spa9 VFG0395 Protein 1.2 43