Gene Information

Name : SbBS512_E0947 (SbBS512_E0947)
Accession : YP_001879630.1
Strain : Shigella boydii CDC 3083-94
Genome accession: NC_010658
Putative virulence/resistance : Unknown
Product : transposase InsN for insertion sequence element B
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 877895 - 878146 bp
Length : 252 bp
Strand : +
Note : identified by match to protein family HMM PF01527

DNA sequence :
ATGAAAAAAAGAAATTTTAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTTGTTGACCAGAAATACACGGTGGCAGA
TGCCGCCAAAGCTATGGATGTTGGCCTTTCCACAATGACAAGATGGGTCAAACAACTGCGTGATGAGCGTCAGGGCAAAA
CACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGCATGGTGATGCTG
CCAACTTACTGA

Protein sequence :
MKKRNFSAEFKRESAQLVVDQKYTVADAAKAMDVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRKLRKKLQRMVML
PTY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
l7045 CAD33744.1 - Not tested PAI I 536 Protein 2e-30 94
orfA CAE85179.1 OrfA protein, IS911 Not tested PAI V 536 Protein 2e-30 94
api80 CAF28554.1 putative transposase Not tested YAPI Protein 5e-29 90
insN YP_002152325.1 transposase for insertion sequence element IS911 Not tested Not named Protein 5e-29 90
unnamed CAD42034.1 hypothetical protein Not tested PAI II 536 Protein 7e-20 61
RS05 AAP82950.1 putative transposase Not tested PAPI-2 Protein 9e-15 52
unnamed ACU09431.1 IS911 transposase orfA Not tested LEE Protein 1e-15 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SbBS512_E0947 YP_001879630.1 transposase InsN for insertion sequence element B VFG1485 Protein 7e-31 94
SbBS512_E0947 YP_001879630.1 transposase InsN for insertion sequence element B VFG1553 Protein 3e-20 61