|
Name : murD (SbBS512_E0081) Accession : YP_001878898.1 Strain : Shigella boydii CDC 3083-94 Genome accession: NC_010658 Putative virulence/resistance : Unknown Product : UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0771 EC number : 6.3.2.9 Position : 88056 - 89372 bp Length : 1317 bp Strand : + Note : UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation DNA sequence : ATGGCTGATTATCAGGGTAAAAATGTCGTCATTATCGGCCTGGGCCTCACCGGGCTTTCCTGCGTGGACTTTTTCCTCGC TCGCGGTGTGACGCCGCGCGTTATGGATACGCGTATGACACCGCCTGGCCTGGATAAATTACCCGAAGCCGTAGAACGCC ACACGGGCAGTCTGAATGATGAATGGCTGATGGCGGCAGATCTGATTGTCGCCAGTCCCGGTATTGCACGGGCGCATCCA TCCTTAAGCGCTGCCGCTGATGCCGGAATCGAAATCGTTGGCGATATCGAGCTGTTCTGCCGCGAAGCACAAGCACCGAT TGTGGCGATTACCGGTTCTAACGGCAAAAGCACGGTCACCACGCTAGTGGGTGAAATGGCGAAAGCGGCGGGGGTTAACG TTGGTGTGGGTGGCAATATTGGCCTGCCAGCGTTGATGCTGCTTGATGCTGAGTGCGAACTGTACGTGCTGGAACTGTCG AGCTTCCAGCTGGAAACCACTTCCAGCTTACAGGCGGTGGCGGCGACCATTCTGAACGTGACTGAAGATCATATGGACCG CTATCCGTTTGGTTTGCAGCAATACCGTGCGGCAAAATTGCGTATTTACGAAAATGCGAAAGTTTGTGTCGTCAATGCTG ATGATGCCTTAACAATGCCGATTCGCGGTGCTGATGAACGCTGCGTCAGCTTTGGCGTCAACATGGGTGACTATCACCTG AATCATCAGCAGGGAGAAACCTGGCTGCGAGTGAAAGGCGAGAAAGTGCTGAACGTGAAAGAGATGAAACTTTCTGGGCA GCATAACTACACCAATGCGCTGGCAGCACTGGCACTGGCAGACGCAGCTGGTTTGCCGCGCGCCAGCAGCCTGAAAGCGT TAACCACCTTCACCGGTCTGCCGCATCGCTTTGAAGTGGTGCTGGAGCACAATGGCGTACGCTGGATTAACGATTCGAAA GCCACTAACGTCGGCAGTACGGAAGCGGCGTTGAATGGCTTGCAGGTAGACGGCACGCTGCATTTGTTGCTGGGCGGCGA TGGTAAATCGGCGGACTTCAGTCCACTGGCGCGCTATCTGAATGGCGACAACGTGCGTTTGTACTGTTTTGGTCGTGACG GTGCGCAGCTGGCGGCGCTACGCCCGGAAGTGGCAGAACAAACCGAAACTATGGAACAGGCGATGCGCTTGCTGGCTCCG CGTGTTCAGCCGGGCGATATGGTTCTGCTCTCCCCGGCCTGTGCCAGCCTTGATCAGTTCAAGAACTTTGAACAACGAGG CAATGAGTTTGCCCGTCTGGCGAAGGAGTTAGGTTGA Protein sequence : MADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDEWLMAADLIVASPGIARAHP SLSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLPALMLLDAECELYVLELS SFQLETTSSLQAVAATILNVTEDHMDRYPFGLQQYRAAKLRIYENAKVCVVNADDALTMPIRGADERCVSFGVNMGDYHL NHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAALALADAAGLPRASSLKALTTFTGLPHRFEVVLEHNGVRWINDSK ATNVGSTEAALNGLQVDGTLHLLLGGDGKSADFSPLARYLNGDNVRLYCFGRDGAQLAALRPEVAEQTETMEQAMRLLAP RVQPGDMVLLSPACASLDQFKNFEQRGNEFARLAKELG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00311 | YP_008207776.1 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | Not tested | AbaR25 | Protein | 8e-55 | 45 |
| BJAB0868_00315 | YP_008211641.1 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | Not tested | AbaR26 | Protein | 8e-55 | 45 |
