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Name : SbBS512_E0767 (SbBS512_E0767) Accession : YP_001879477.1 Strain : Shigella boydii CDC 3083-94 Genome accession: NC_010658 Putative virulence/resistance : Unknown Product : prophage integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 719456 - 720697 bp Length : 1242 bp Strand : - Note : identified by match to protein family HMM PF00589 DNA sequence : ATGGCAAGAAAGGCAACCCCACTCACCACCACACAGATCAAAGCAGCTAAACCAGCAGAAAAAGAATACACCTTACAGGA TGGCGGCGGGCTTTTTCTCGTTATTAAGCCGTCTGGTTCGAAACTATGGCGATTCAACTACTATCGACCTTCGAACAAAA AACGAACACTCATTAGTTTGGGATCGCTTGATGAAGTCTCCCTTGCTGATGCCAGAAAACGCCGTAGCGAGTACAGGACG TTAATTGCGGCAGGAACCGACCCGCAGGAATACGAACGGCAAAAACGCGAAGCAGAGGCTCGACGACAGGGCAACACGTT CGAAAATGTGGCCGCATTGTGGTACGAAATGAAAAAAAACCAGAATCTCGCCCACAATACGATCAAGGACATCTGGCGCT CGCTAGAGAAATATGTATTCCCGTATATCGGAAACACACCGATAGATACTCTCACCGCTCGCCGCTTTGTTGAGATACTC ACGCCCATCAAGGCACGTGGCAACCTGGAAACACTGAAACGCGTTTTACAGCGCATCAATGAAGTGATGGATTTTGCTGC CAACAGTGGAATGATTGACATCAACACCGCCGCGAACGTTCGCAAGACATTCCCTTCTCCCACCAAAAAGCACATGCCAA CCATCCGGCCGGAACAACTACCGCAGCTAATGCACGATTTATCGATCGCCAGCATAGAACGGCAAACCAGATTACTGATT GAGTGGCAGTTGTTAACCGCAACCCGCCCAGCCGAAGCCTCTGCCGCACGGTGGGAAGAAATCAACCTTGAGGCGGCAAC CTGGACGATACCAGCCGGACGCATGAAGATGCGCCGTGATCATGTGATCCCCCTTTGCGCTCAGGCGATGGCAGTGCTTG AAGCCATGAAGCCGATTAGCGCACGAAGGGAGCATGTTTTCCCAAGTCTTAAAAATCCAGTGCAACCAATGAGCAGCCAG ACAGCAAACGCAGCATTACGGCGAATGGGTTACACTGGTGTGCTGGTATCTCACGGACTACGCGCCATATTCAGCACAGC GGCGAACGAAGAAGGATTTGAGCCGGACGTAATCGAGGCCGCACTCGCACACGTGGACACGAACGAAGTTAGACGGGCAT ACAACCGAAGCAACTACCTGGAAAAACGTAAAGTGTTAATGTGCTGGTGGGGTGATTTTGTGGAAGCAGCCGCAACCGGA ACAACCATCGCCAGCGGGCACAGAGGATTACGCGGAAGGTAA Protein sequence : MARKATPLTTTQIKAAKPAEKEYTLQDGGGLFLVIKPSGSKLWRFNYYRPSNKKRTLISLGSLDEVSLADARKRRSEYRT LIAAGTDPQEYERQKREAEARRQGNTFENVAALWYEMKKNQNLAHNTIKDIWRSLEKYVFPYIGNTPIDTLTARRFVEIL TPIKARGNLETLKRVLQRINEVMDFAANSGMIDINTAANVRKTFPSPTKKHMPTIRPEQLPQLMHDLSIASIERQTRLLI EWQLLTATRPAEASAARWEEINLEAATWTIPAGRMKMRRDHVIPLCAQAMAVLEAMKPISARREHVFPSLKNPVQPMSSQ TANAALRRMGYTGVLVSHGLRAIFSTAANEEGFEPDVIEAALAHVDTNEVRRAYNRSNYLEKRKVLMCWWGDFVEAAATG TTIASGHRGLRGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| int | AAK20803.1 | integrase | Not tested | VPI | Protein | 4e-104 | 52 |
| unnamed | AAA82714.1 | integrase | Not tested | VPI | Protein | 4e-104 | 52 |
| VC0847 | NP_230494.1 | phage family integrase | Not tested | VPI-1 | Protein | 5e-104 | 52 |
| VC0395_A0372 | YP_001216328.1 | phage family integrase | Not tested | VPI-1 | Protein | 5e-104 | 52 |
| int | AAK20773.1 | integrase | Not tested | VPI | Protein | 4e-104 | 52 |
| VC0516 | NP_230167.1 | phage integrase | Not tested | VSP-2 | Protein | 2e-98 | 50 |
| VC1758 | NP_231394.1 | phage family integrase | Not tested | VPI-2 | Protein | 5e-88 | 47 |
| VC0395_A1357 | YP_001217300.1 | phage family integrase | Not tested | VPI-2 | Protein | 5e-88 | 47 |
| VPI2_0001 | ACA01818.1 | phage family integrase | Not tested | VPI-2 | Protein | 3e-88 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SbBS512_E0767 | YP_001879477.1 | prophage integrase | VFG1092 | Protein | 2e-88 | 47 |
