Gene Information

Name : SbBS512_E0766 (SbBS512_E0766)
Accession : -
Strain : Shigella boydii CDC 3083-94
Genome accession: NC_010658
Putative virulence/resistance : Unknown
Product : -
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 718941 - 719445 bp
Length : 505 bp
Strand : +
Note : IS1 transposase orfB; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF03400

DNA sequence : 
ATGCCGGGCAACTGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTACGTCACTTAAAAAACTCAGACCGCAGTCGGT
AACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAACAGTGGGGCTATGTCGGGGCTAAAT
CGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGTCTCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACTATG
GCGGACGCTGGGGCGTCTTATGAGCCTGCTGTCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATG
AATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGG
CAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTA
TCTGAACATAAAACACTATCAATAA

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 DNA e-279 98.4
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 DNA e-279 98.4
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 DNA e-279 98.4
InsB (Tn1) CAJ77072.1 Transposase Not tested AbaR1 DNA e-267 98.3
insB ADD91744.1 transposase Not tested PAI-I AL862 DNA e-126 95.2
aec38 AAW51721.1 InsB Not tested AGI-3 DNA e-106 92.4
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI DNA e-116 92.3
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI DNA e-116 92.3
tnpH AAD44742.1 TnpH Not tested SHI-2 DNA e-115 91.9
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 DNA e-109 91.9
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 DNA e-115 91.7
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 DNA e-115 91.4