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Name : SbBS512_E0634 (SbBS512_E0634) Accession : YP_001879370.1 Strain : Shigella boydii CDC 3083-94 Genome accession: NC_010658 Putative virulence/resistance : Virulence Product : periplasmic pilus chaperone family protein Function : - COG functional category : N : Cell motility COG ID : COG3121 EC number : - Position : 604287 - 605018 bp Length : 732 bp Strand : - Note : identified by match to protein family HMM PF00345; match to protein family HMM PF02753 DNA sequence : ATGACATTTATGAAAGGACTACCCCTTTTGTTGTTGGTTGCCAGTCTGTGCAGCCACGCTGCACTACAACCCGATCGCAC TCGTATTGTGTTTAACGCTAATGATAAAGCTACCAGTCTGCGGGTGGATAATCGTAGCGATAAACTCCCCTACCTCGCTT ATTCCTGGCTCGAAAATGAAAAAGGGGAGAAAAGCGATGATCTTCTGGTCGCCCTGCCGCCGATACAACGTCTGGAACCG AAAGCAACAACGCAGGTACGGATAGTAAAGCAAGCCTCGACCACAAAATTACCGGGCGATCGCGAAACGCTATTTTTCTA CAATATGCGTGAAATTCCTCCCGCCCCGGAAAAAAACAGCGACCATGCCGTTCTGCAAGTCGCCATTCAGAGTCGTATCA AGGTGTTCTGGCGACCGGCTGCATTACGCAAGAAAGCAGGAGAAAAGGTCGAACTGCAGTTACAGGTCAGCCAGCAGGGC AACCAACTGACACTGAAAAATCCTACCGCGTATTATCTGACCATTGCCTACTTGGGACGAAATGAAAAAGGCGTTCTCCC CGGCTTCAAAACCGTGATGGTTGCGCCTTTTAGTACGGTCAACACAAACACCGGAAATTATAGCGGCAGCCAGTTTTATC TCGGTTATATGGATGATTACGGCGCGTTACGCATGACGACGCTCAACTGCAGCGGACAATGCCATTTACAAGCCGTGGAG GCGAAGAAATGA Protein sequence : MTFMKGLPLLLLVASLCSHAALQPDRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKSDDLLVALPPIQRLEP KATTQVRIVKQASTTKLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALRKKAGEKVELQLQVSQQG NQLTLKNPTAYYLTIAYLGRNEKGVLPGFKTVMVAPFSTVNTNTGNYSGSQFYLGYMDDYGALRMTTLNCSGQCHLQAVE AKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| papD | NP_755464.1 | PapD protein | Virulence | PAI I CFT073 | Protein | 2e-33 | 42 |
| prfD | CAD42028.1 | PrfD protein | Virulence | PAI II 536 | Protein | 4e-38 | 42 |
| papD | AAZ04423.1 | P pilus chaperone | Virulence | PAI I APEC-O1 | Protein | 6e-38 | 42 |
| papD | AAL67413.1 | PapD | Virulence | PAI II CFT073 | Protein | 5e-38 | 42 |
| papD | YP_854253.1 | pilus assembly protein chaperone PapD | Virulence | PAI I APEC-O1 | Protein | 8e-38 | 42 |
| papD_2 | NP_757033.1 | PapD protein | Virulence | PAI II CFT073 | Protein | 7e-38 | 42 |
| papD | YP_002414014.1 | Chaperone protein PapD | Not tested | Not named | Protein | 7e-38 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SbBS512_E0634 | YP_001879370.1 | periplasmic pilus chaperone family protein | VFG0885 | Protein | 1e-33 | 42 |
| SbBS512_E0634 | YP_001879370.1 | periplasmic pilus chaperone family protein | VFG1547 | Protein | 3e-38 | 42 |
| SbBS512_E0634 | YP_001879370.1 | periplasmic pilus chaperone family protein | VFG0896 | Protein | 3e-38 | 42 |
