Gene Information

Name : argF (SbBS512_E4829)
Accession : YP_001882962.1
Strain : Shigella boydii CDC 3083-94
Genome accession: NC_010658
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase subunit I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0078
EC number : 2.1.3.3
Position : 4500749 - 4501753 bp
Length : 1005 bp
Strand : +
Note : catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; E. coli K12 has two genes, argF and argI, capable of producing functional ornithine carbamoyltransferase. When both are active in th

DNA sequence :
ATGTCCGGGTTTTATCATAAGCATTTCCTGAAATTACTCGATTTCACGCCAGCTGAACTCAACAGCCTGCTGCAGTTAGC
CGCGAAGCTGAAAGCCGATAAGAAAAGCGGCAAAGAAGAAGCCAAACTCACTGGTAAAAACATCGCGCTCATCTTCGAAA
AAGACTCGACCCGTACCCGATGCTCTTTCGAAGTTGCCGCATATGACCAGGGTGCTCGCGTTACTTATCTCGGCCCAAGC
GGCAGTCAGATTGGTCATAAAGAGTCGATTAAAGACACTGCCCGCGTGCTGGGTCGCATGTATGACGGTATTCAGTATCG
CGGCTATGGTCAGGAGATTGCCGAAACACTGGCGGAATACGCTGGCGTGCCGGTATGGAACGGCCTGACCAATGAGTTTC
ACCCCACGCAGTTGCTGGCGGATCTCCTCACCATGCAGGAGCATTTACCCGGTAAAGCATTCAACGAAATGACGCTGGTC
TATGCAGGTGACGCACGTAACAACATGGGCAATTCGATGCTCGAAGCTGCGGCGCTTACCGGTCTGGATTTGCGTCTGGT
CGCGCCACAAGCATGCTGGCCGGAAGCTGCGCTGGTTACGGAATGCCGCGCCCTGGCACAGCAAAATGGCGGGAATATTA
CGCTGACGGAAGATGTAGCCAAAGGTGTTGAAGGTGCTGACTTTATCTATACCGATGTATGGGTGTCGATGGGGGAAGCA
AAAGAGAAATGGGCAGAACGGATTGCATTACTGCGTGATTATCAGGTGAACAGCAAGATGATGCAGTTGACCGGTAACCC
GGAGGTCAAATACCTCCACTGCCTGCCCGCGTTTCATGACGACCAGACGACGCTTGGTAAGAAAATGGCGGAAGAGTTTG
GCCTACATGGCGGAATGGAAGTGACTGATGAGGTCTTCGAATCTGCCGCCAGCATTGTTTTTGATCAGGCGGAAAACCGC
ATGCATACCATCAAAGCGGTGATGGTCGCGACGCTCAGTAAATAA

Protein sequence :
MSGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPS
GSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIAETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLV
YAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEA
KEKWAERIALLRDYQVNSKMMQLTGNPEVKYLHCLPAFHDDQTTLGKKMAEEFGLHGGMEVTDEVFESAASIVFDQAENR
MHTIKAVMVATLSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 4e-90 59
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 4e-90 59
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 6e-90 59
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 2e-89 58
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-89 58
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-89 58
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 6e-90 58