Gene Information

Name : SbBS512_E4730 (SbBS512_E4730)
Accession : -
Strain : Shigella boydii CDC 3083-94
Genome accession: NC_010658
Putative virulence/resistance : Unknown
Product : -
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4419621 - 4420124 bp
Length : 504 bp
Strand : -
Note : IS1 transposase orfB; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF03400

DNA sequence : 
ATGCCGGGCAACTGCACGCATTATGGGCGTTAGCCTCAACACGATTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGT
AACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAACAGTGGGGATACGTCGGGGCTAAAT
CGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGGCTCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACTATG
GCGACGCAGGGGCGTCTTATGAGCTTGCTGTCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCACTGTATGA
ATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGC
AGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTAT
CTGAACATAAAACACTATCAATAA

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 DNA e-281 98.2
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 DNA e-281 98.2
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 DNA e-281 98.2
InsB (Tn1) CAJ77072.1 Transposase Not tested AbaR1 DNA e-269 98.1
insB ADD91744.1 transposase Not tested PAI-I AL862 DNA e-255 94.6
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI DNA e-232 91.6
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI DNA e-232 91.6
aec38 AAW51721.1 InsB Not tested AGI-3 DNA e-204 91.6
tnpH AAD44742.1 TnpH Not tested SHI-2 DNA e-229 91.2
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 DNA e-228 91
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 DNA e-174 90.4
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 DNA e-224 90.4