Gene Information

Name : SbBS512_E4637 (SbBS512_E4637)
Accession : -
Strain : Shigella boydii CDC 3083-94
Genome accession: NC_010658
Putative virulence/resistance : Unknown
Product : -
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4334288 - 4335694 bp
Length : 1407 bp
Strand : -
Note : IS66 family element, transposase; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF03050

DNA sequence :
ATGAGCAGCTCACTTCCTGACGATATCAATGCACTGAAACGTCTCCTTGCCGAACAGGAGGCGCTGAACCGTGCCCTGCT
GGAAAAGCTGAACGAGCGTGAACGCGAAATAGACCATCTGCAGGCACAGCTGGATAAGCTGCGCCGGATGAACTTCGGCA
GCCGCTCCGAAAAAGTCTCCCGTCGTATCGCACAGATGGAAGCTGACCTGAAGGCACTTCAGAAAGAAAGTGATACCCTT
ACCGGTCGGGTTGACGACCCGGCCGTGCAGCGCCCGCTGCGTCAAACCCGCACCCGCAAACCGTTCCCCGAATCACTCCC
CCGCGATGAAAAACGGCTGCTGCCGGCAGCGTCATGCTGCCCGGAATGTGGAGGCTCACTGAGCTATCTGGGTGAGGATG
CCGCCGAACAGCTGAAGTTGATGCGCAGCGTCTTCCGGGTTATCCGGACTGTACGTGAAAAGCATGCCTGTACTCAGTGC
GATGCCATCGTGCAGGCCCCCGCGCCTTCACGGCCCATCGAGCGGGGTATCGCAGGACCGGGGCTGCTGGCCCGCGTGCT
GATCTCAAAGTATGCAGAGCACACCCCGCTGTACCGCCAGTCTGAAATGTACGGCCGCCAGGGCGTGGAGCTGAGTCGTT
CACTGCTGTCGGGCTGGGTGGATGCATGCTGCCGGCTACTGTCACCGCTGGAAGAAGCGCTTCAGGACTATGTGCTGACT
GACGGTAAGCTCCATGCTGATGACACGCCTGTCCCGGTGCTGTTGCCAGGCAATAAGAAAACGAAGACCGGGCGGTTATG
GACCTACGTTCGTGACGACCGTAACGCCGGGTCAACGCTGGCGCCGGCGGTGTGGTTCGCTTACAGCCCGGACAGAAAAG
GCATCCATCCGCAGACCCATCTTGCGGGGTTCAGTGGTGTACTGCAGGCGGATGCATACGCCGGGTTCAACGAGCTGTAC
CGGGATGGCCGGATAACGGAAGCCGCCTGTTGGGCTCACGCCCGCCGTAAAATCCACGATGTGCACGTTCGCACCCCGTC
AGCCCTGACGGAGGAAGCGCTGAAACGGATCGGCGAACTGTACGCCATCGAGGCAGAGATAAGGGGAATGACGGCGGAGC
AGCGCCTTGCCGAACGTCAGTTGAAAATGAAACCGCTGCTGAAATCCCTGGAAAGCTGGCTGCGTGAAAAGATGAAAACC
CTGTCGCGACACTCAGAACTGGCGAAAGCGTTCGCATACGCCCTGAACCAGTGGCCGGCGCTGACGTACTATGCAGATGA
TGGCTGGGCTGAGCGGACAATAACATCGCTGAAAATGCGTTGCGGATGGTCAGTCTGGGCCGCAAAAACTACCTGTTCTT
CGGTTCGGATCATGGAGGAGAGCGGGGAGCGCTGCTGTACAGCCTGA

Protein sequence :
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 DNA 0.0 98.1
ECUMN_3329 - - Not tested Not named DNA 0.0 98.1
unnamed AAC31494.1 L0015 Not tested LEE DNA 0.0 87.2
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 DNA 0.0 87.2
Z5098 NP_290249.1 prophage-associated protein Not tested LEE DNA 0.0 87.2
unnamed CAC39285.1 hypothetical protein Not tested LPA DNA 0.0 87.2
Z1131 NP_286666.1 hypothetical protein Not tested TAI DNA 0.0 87.1
Z1570 NP_287074.1 hypothetical protein Not tested TAI DNA 0.0 87.1
ECs4547 NP_312574.1 hypothetical protein Not tested LEE DNA 0.0 87.1
unnamed ACU09439.1 IS66 family element transposase Not tested LEE DNA 0.0 87
l0015 CAD33775.1 L0015 protein Not tested PAI I 536 DNA 0.0 86.9
unnamed AAL57570.1 unknown Not tested LEE DNA 0.0 86.7
tnp AEA34686.1 transposase Not tested Not named DNA 0.0 86.7
st57 CAC81895.1 ST57 protein Not tested LEE II DNA 0.0 86.6
unnamed AAL08460.1 unknown Not tested SRL DNA 0.0 86.5
unnamed - - Not tested LEE DNA 0.0 86.5
unnamed CAI43806.1 hypothetical protein Not tested LEE DNA 0.0 86.5
ECO26_5299 - - Not tested LEE DNA 0.0 86.5