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Name : arsB (SbBS512_E3819) Accession : YP_001882112.1 Strain : Shigella boydii CDC 3083-94 Genome accession: NC_010658 Putative virulence/resistance : Resistance Product : arsenical pump membrane protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1055 EC number : - Position : 3544892 - 3546181 bp Length : 1290 bp Strand : - Note : identified by match to protein family HMM PF02040; match to protein family HMM PF03600; match to protein family HMM TIGR00935 DNA sequence : ATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATTGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAG TGCAACGCTCGGCGCAGTACTGGCGTTAGTTACGGGCGTGGTCCATCCGGGTGATATTCCGGTGGTGTGGAATATCGTCT GGAACGCGACGGCTGCGTTTATTGCCGTCATTATCATCAGCCTGCTGCTGGATGAGTCCGGCTTTTTTGAATGGGCGGCG CTGCACGTCTCACGCTGGGGTAATGGTCGTGGTCGCTTGCTGTTTACCTGGATTGTCCTGCTCGGTGCTGCCGTTGCCGC CCTGTTTGCCAATGATGGCGCAGCGCTTATTTTGACGCCGATTGTCATCGCCATGCTGCTGGCTTTAGGATTCAGTAAAG GCACGACGCTGGCGTTCGTGATGGCGGCCGGATTCATTGCCGATACCGCCAGCCTGCCGCTTATTGTCTCCAACTTGGTG AATATCGTTTCCGCTGATTTCTTTGGCCTCGGCTTTCGCGAATACGCCTCGGTGATGGTGCCGGTGGATATCGCCGCGAT TGTTGCCACGCTGGTGATGCTACATCTCTATTTTCGCAAAGATATTCCGCAGAACTACGATATGGCGCTGCTGAAATCTC CCGCAGAAGCGATCAAAGATCCTGCTACGTTCAAAACTGGCTGGGTTGTTTTACTGCTTCTGCTGGTGGGATTTTTCGTC CTGGAACCGCTCGGCATTCCGGTGAGCGCCATTGCAGCTGTGGGCGCGCTGATATTATTTGTCGTCGCTAAACGCGGTCA TGCGATTAATACGGGTAAAGTCCTGCGCGGTGCCCCCTGGCAAATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTT ATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGTACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCG ATGCTCGGCACCGGATTCCTCACAGCCTTCCTCTCTTCTATTATGAACAATATGCCGACGGTACTGGTTGGCGCGTTGTC CATTGATGGCAGCACGGCATCTGGCGTTATCAAAGAAGCGATGGTTTATGCCAATGTGATTGGCTGCGATTTGGGACCGA AAATTACCCCAATTGGTAGCCTGGCTACACTACTCTGGCTGCACGTACTTTCACAGAAGAATATGACTATCAGCTGGGGA TATTACTTCCGTACAGGGATTATCATGACCCTGCCTGTGCTGTTTGTGACGCTGGCTGCGCTGGCGCTACGTCTCTCTTT CACTTTGTAA Protein sequence : MLLAGAIFVLTIVLVIWQPKGLGIGWSATLGAVLALVTGVVHPGDIPVVWNIVWNATAAFIAVIIISLLLDESGFFEWAA LHVSRWGNGRGRLLFTWIVLLGAAVAALFANDGAALILTPIVIAMLLALGFSKGTTLAFVMAAGFIADTASLPLIVSNLV NIVSADFFGLGFREYASVMVPVDIAAIVATLVMLHLYFRKDIPQNYDMALLKSPAEAIKDPATFKTGWVVLLLLLVGFFV LEPLGIPVSAIAAVGALILFVVAKRGHAINTGKVLRGAPWQIVIFSLGMYLVVYGLRNAGLTEYLSGVLNVLADNGLWAA MLGTGFLTAFLSSIMNNMPTVLVGALSIDGSTASGVIKEAMVYANVIGCDLGPKITPIGSLATLLWLHVLSQKNMTISWG YYFRTGIIMTLPVLFVTLAALALRLSFTL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| arsB2 | YP_001007633.1 | arsenical pump membrane protein | Not tested | YAPI | Protein | 2e-156 | 92 |
| arsB | YP_005754065.1 | arsenical pump membrane protein | Not tested | Type-XI SCCmec | Protein | 4e-95 | 59 |
| arsB | YP_252017.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 1e-95 | 59 |
| SH0109 | YP_252024.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 4e-99 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| arsB | YP_001882112.1 | arsenical pump membrane protein | BAC0578 | Protein | 9e-161 | 94 |
| arsB | YP_001882112.1 | arsenical pump membrane protein | BAC0576 | Protein | 8e-160 | 94 |
| arsB | YP_001882112.1 | arsenical pump membrane protein | BAC0031 | Protein | 8e-156 | 91 |
| arsB | YP_001882112.1 | arsenical pump membrane protein | BAC0577 | Protein | 1e-154 | 90 |
| arsB | YP_001882112.1 | arsenical pump membrane protein | BAC0574 | Protein | 6e-97 | 60 |
| arsB | YP_001882112.1 | arsenical pump membrane protein | BAC0575 | Protein | 3e-100 | 60 |
