Gene Information

Name : cyoB (SbBS512_E0353)
Accession : YP_001879141.1
Strain : Shigella boydii CDC 3083-94
Genome accession: NC_010658
Putative virulence/resistance : Unknown
Product : cytochrome o ubiquinol oxidase subunit I
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0843
EC number : 1.10.3.-
Position : 342699 - 344690 bp
Length : 1992 bp
Strand : -
Note : identified by match to protein family HMM PF00115; match to protein family HMM TIGR02843

DNA sequence :
ATGTTCGGAAAATTATCACTTGATGCAGTCCCGTTCCATGAACCTATCGTCATGGTTACGATCGCTGGCATTATTTTGGG
AGGTCTGGCGCTCGTTGGCCTGATCACTTACTTCGGTAAGTGGACCTACCTGTGGAAAGAGTGGCTGACCTCCGTCGACC
ATAAACGCCTCGGTATCATGTATATCATCGTGGCGATTGTGATGTTGCTGCGTGGTTTTGCTGACGCCATTATGATGCGT
AGCCAGCAGGCTCTTGCCTCGGCGGGCGAAGCGGGCTTCCTGCCACCTCACCACTACGATCAGATCTTCACCGCGCACGG
CGTGATTATGATCTTCTTCGTGGCGATGCCTTTCGTTATCGGTCTGATGAACCTGGTGGTTCCGCTGCAGATCGGCGCGC
GTGACGTTGCGTTCCCGTTCCTCAACAACTTAAGCTTCTGGTTTACTGTTGTTGGTGTGATTCTGGTTAACGTTTCTCTC
GGCGTGGGCGAATTTGCGCAGACCGGCTGGCTGGCCTATCCACCGCTATCGGGAATAGAGTACAGTCCGGGAGTCGGTGT
TGATTACTGGATATGGAGTCTCCAGCTATCCGGTATAGGTACGACGCTTACCGGTATCAACTTCTTCGTTACCATTCTGA
AGATGCGCGCACCGGGCATGACCATGTTCAAGATGCCAGTATTTACCTGGGCATCACTGTGCGCGAACGTACTGATTATT
GCTTCCTTCCCAATTCTAACGGTTACCGTCGCGTTGTTGACCCTGGATCGCTATCTGGGCACCCATTTCTTTACCAACGA
TATGGGTGGCAACATGATGATGTACATCAACCTGATTTGGGCCTGGGGCCACCCGGAAGTTTACATCCTGATCCAGCCTG
TTTTCGGTGTGTTCTCCGAAATTGCGGCAACCTTCTCGCGTAAACGTCTGTTTGGTTATACCTCGCTGGTATGGGCAACC
GTCTGTATCACCGTGCTGTCGTTCATCGTTTGGCTGCACCACTTCTTTACGATGGGTGCGGGCGCGAACGTAAACGCCTT
CTTTGGTATCACCACAATGATTATCGCCATCCCGACCGGGGTGAAGACCTTCAACTGGCTGTTCACCATGTATCAGGGCC
GTATCGTGTTCCATTCTGCGATGCTGTGGACCATCGGTTTTATCGTCACTTTCTCGGTGGGCGGGATGACTGGCGTGCTG
CTGGCAGTACCGGGCGCGGACTTCGTTCTGCATAACAGCCTGTTCCTGATTGCGCACTTCCATAACGTTATCATCGGCGG
CGTGGTCTTCGGCTGCTTCGCAGGGATGACCTACTGGTGGCCTAAAGCGTTCGGTTTCAAACTGAATGAAACCTGGGGTA
AACGCGCGTTCTGGTTCTGGATCATCGGCTTCTTCGTTGCCTTTATGCCGCTGTATGCGCTGGGCTTCATGGGCATGACC
CGTCGTTTGAGCCAGCAGATTGACCCGCAGTTCCACACCATGCTGATGATTGCAGCTAGCGGTGCAGTACTGATTGCGCT
GGGTATTCTCTGCCTCGTTATTCAGATGTACGTTTCTATTCGCGACCGCGACCAGAACCGTGACCTGACTGGCGACCCGT
GGGGTGGCCGTACGCTGGAGTGGGCAACCTCTTCCCCGCCTCCGTTCTATAACTTTGCCGTTGTGCCGCACGTTCACGAG
CGTGATGCATTCTGGGAAATGAAAGAGAAAGGCGAAGCGTATAAAAAGCCTGACCACTATGAAGAAATTCATATGCCGAA
AAACAGCGGTGCAGGTATCGTCATTGCAGCTTTCTCCACCATCTTCGGTTTCGCCATGATCTGGCATATCTGGTGGCTGG
CGATTGTTGGCTTCGCAGGCATGATCATCACCTGGATCGTGAAAAGCTTCGACGAGGACGTGGATTACTACGTGCCGGTG
GCAGAAATCGAAAAACTGGAAAACCAGCATTTCGATGAGATTACTAAGGCAGGGCTGAAAAATGGCAACTGA

Protein sequence :
MFGKLSLDAVPFHEPIVMVTIAGIILGGLALVGLITYFGKWTYLWKEWLTSVDHKRLGIMYIIVAIVMLLRGFADAIMMR
SQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVVPLQIGARDVAFPFLNNLSFWFTVVGVILVNVSL
GVGEFAQTGWLAYPPLSGIEYSPGVGVDYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLII
ASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILIQPVFGVFSEIAATFSRKRLFGYTSLVWAT
VCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKTFNWLFTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVL
LAVPGADFVLHNSLFLIAHFHNVIIGGVVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMT
RRLSQQIDPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWATSSPPPFYNFAVVPHVHE
RDAFWEMKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMIWHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPV
AEIEKLENQHFDEITKAGLKNGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1478 YP_001800872.1 cytochrome c oxidase subunit I Not tested Not named Protein 2e-82 44