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Name : SbBS512_E3493 (SbBS512_E3493) Accession : - Strain : Shigella boydii CDC 3083-94 Genome accession: NC_010658 Putative virulence/resistance : Unknown Product : - Function : - COG functional category : - COG ID : - EC number : - Position : 3246086 - 3246466 bp Length : 381 bp Strand : - Note : IS1 transposase orfB; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF03400 DNA sequence : ATGTCGCGCCAGTGCACGCATTATGGGCGTTGGCCTCAACACGGTTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGT AACCTCGCGCATACAACCGGGCAGTGATGTGATTGTCTGCGCTGAAATGGACGAACAGTGGGGCTACGTCGGTGCTAAAT CACGTCAGCGCTGGCTGTTTTACGCGTATGACAGGATACGGAGGACGGTTGTGGCGCACGTCTTCGGTGAACGCACTCTG GCCACACTGGAGCGTCTTCTGAGCCTGCTGTCGGCCTTTGAGGTCGTGGTATGGATGACGGATGGCTGGCCGCTGTATGA ATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGTGA Protein sequence : - |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec38 | AAW51721.1 | InsB | Not tested | AGI-3 | DNA | e-216 | 99.7 |
| Z1192 | NP_286727.1 | IS1 protein InsB | Not tested | TAI | DNA | e-216 | 99.7 |
| Z1632 | NP_287135.1 | IS1 protein InsB | Not tested | TAI | DNA | e-216 | 99.7 |
| tnpH | AAD44742.1 | TnpH | Not tested | SHI-2 | DNA | e-215 | 99.5 |
| S4059 | NP_839227.1 | IS1 orfB | Not tested | SHI-2 | DNA | e-214 | 99.2 |
| insB | NP_709451.1 | IS1 ORF2 | Not tested | SHI-2 | DNA | e-208 | 97.6 |
| insB | ADD91744.1 | transposase | Not tested | PAI-I AL862 | DNA | e-182 | 93.9 |
