Name : SbBS512_E3453 (SbBS512_E3453) Accession : YP_001881787.1 Strain : Shigella boydii CDC 3083-94 Genome accession: NC_010658 Putative virulence/resistance : Unknown Product : IS1 transposase orfB Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1662 EC number : - Position : 3208432 - 3208809 bp Length : 378 bp Strand : + Note : identified by match to protein family HMM PF03400 DNA sequence : ATGGACGAACAGTGGGGATACGTCGGGGCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGGCTCCGGAAGAC GGTTGTTGCGCACGTATTCGGTGAACGCACTATGGCGACGCTGGGGCGTCTTATGAGCTTGCTGTCACCCTTTGACGTGG TGATATGGATGACGGATGGCTGGCCACTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACG CAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATC GGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAA Protein sequence : MDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYT QRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
EC042_4085 | YP_006098368.1 | transposase | Not tested | Tn2411 | Protein | 9e-56 | 100 |
EC042_4113 | YP_006098397.1 | transposase | Not tested | Tn2411 | Protein | 9e-56 | 100 |
insB | NP_458736.1 | insertion element IS1 protein InsB | Not tested | SPI-7 | Protein | 9e-56 | 100 |
insB | ADD91744.1 | transposase | Not tested | PAI-I AL862 | Protein | 4e-54 | 96 |
Z1192 | NP_286727.1 | IS1 protein InsB | Not tested | TAI | Protein | 1e-53 | 94 |
Z1632 | NP_287135.1 | IS1 protein InsB | Not tested | TAI | Protein | 1e-53 | 94 |
insB | NP_709463.1 | IS1 ORF2 | Not tested | SHI-2 | Protein | 2e-52 | 92 |
S4059 | NP_839227.1 | IS1 orfB | Not tested | SHI-2 | Protein | 7e-53 | 92 |
tnpH | AAD44742.1 | TnpH | Not tested | SHI-2 | Protein | 5e-53 | 92 |
insB | NP_709451.1 | IS1 ORF2 | Not tested | SHI-2 | Protein | 4e-51 | 91 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
SbBS512_E3453 | YP_001881787.1 | IS1 transposase orfB | VFG0612 | Protein | 1e-51 | 91 |