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Name : gspH (SbBS512_E3408) Accession : YP_001881746.1 Strain : Shigella boydii CDC 3083-94 Genome accession: NC_010658 Putative virulence/resistance : Virulence Product : general secretion pathway protein GspH Function : - COG functional category : N : Cell motility COG ID : COG2165 EC number : - Position : 3168979 - 3169542 bp Length : 564 bp Strand : - Note : identified by match to protein family HMM PF07963; match to protein family HMM TIGR01708; match to protein family HMM TIGR02532 DNA sequence : GTGCCTGAACGCGGATTCACACTTCTGGAAATCATGCTGGTGATTTTCCTTATCGGCCTTGCCAGTGCGGGCGTGGTACA GACGTTTGCGACCGATTCTGAACCGCCCGCGAAAAAAGCGGCACAGGATTTTCTGACTCGCTTTGCGCAGTTTAATGACA GGGCAGTGATTGAAGGACAGACACTCGGTGTGCTAATCGACCCGCCTGGCTATCAGTTTATGCAGCGTCGTCAGGGGCAG TGGTTGCCCGTTTCTGCGACCCGGTTATCGGCACAGGTTACGGTGCCGAAACAGGTGCAGATGCTGTTACAACCCGGAAG TGATATCTGGCAGAAGGAATATGCGCTGGAGCTGCAACGTCGTCGCCTGACGCTGCACGATATTGAACTGGAGTTGCAAA AAGAGGCGAAAAAGAAGACGCCGCAGATCCGTTTTTCGCCTTTTGAACCCGCCACGCCGTTTACGCTGCGCTTCTACTCG GCGGCGCAAAACGCATGTTGGGCGGTAAAGCTGGCACACGATGGCGCGTTATCCCTCAATCAATGTGATGAGAGGATGCC ATGA Protein sequence : MPERGFTLLEIMLVIFLIGLASAGVVQTFATDSEPPAKKAAQDFLTRFAQFNDRAVIEGQTLGVLIDPPGYQFMQRRQGQ WLPVSATRLSAQVTVPKQVQMLLQPGSDIWQKEYALELQRRRLTLHDIELELQKEAKKKTPQIRFSPFEPATPFTLRFYS AAQNACWAVKLAHDGALSLNQCDERMP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspH | YP_854403.1 | type II secretion protein GspH | Not tested | PAI I APEC-O1 | Protein | 1e-84 | 99 |
| gspH | CAE85230.1 | GspH, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-79 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspH | YP_001881746.1 | general secretion pathway protein GspH | VFG2051 | Protein | 2e-78 | 97 |
