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Name : gspJ (SbBS512_E3406) Accession : YP_001881744.1 Strain : Shigella boydii CDC 3083-94 Genome accession: NC_010658 Putative virulence/resistance : Virulence Product : general secretion pathway protein GspJ Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4795 EC number : - Position : 3168015 - 3168614 bp Length : 600 bp Strand : - Note : identified by match to protein family HMM PF07963; match to protein family HMM TIGR01711; match to protein family HMM TIGR02532 DNA sequence : GTGAGAAGGACTCGCGCTGGTTTCACGTTACTGGAAATGTTGGTGGCAATTGCCATTTTTGCCTCGCTGGCACTGATGGC GCAGCAGGTGACTAACGGCGTCACGCGCGTGAATAGCGCCGTCGCCGATCACGATCAAAAACTAAACCTCATGCAGCAAA CGATGAGTTTTCTGACCCACGATCTGACCCAAATGATGCCGCGTCCGGTAAGAGGCGATCAGGGCCAGCGTGAACCAGCT TTACTGGCTGGCGCTGGCGTGCTGGCGTCTGAGAGTGAAGGAATGCGTTTTGTGCGCGGCGGTGTGGTTAACCCGTTGAT GCGTCTGCCGCGCAGCAATCTGCTCACCGTCGGTTACCGCATTCATGACGGTTATCTCGAACGGTTAGCCTGGCCGCTGA CCGATGCCGCAGGCAGCGTGAAGCCGACAATGCAAAAGTTGATTCCGGCCGATTCGCTCCGTTTGCAGTTCTACGACGGC ACGCGCTGGCAGGAGAGCTGGTCGTCAGTACAGGCGATCCCTGTGGCGGTACGCATGACCCTGCATTCGCCGCAATGGGG CGAGATTGAACGCATCTGGTTGTTACGCGGGCCGCAATAA Protein sequence : MRRTRAGFTLLEMLVAIAIFASLALMAQQVTNGVTRVNSAVADHDQKLNLMQQTMSFLTHDLTQMMPRPVRGDQGQREPA LLAGAGVLASESEGMRFVRGGVVNPLMRLPRSNLLTVGYRIHDGYLERLAWPLTDAAGSVKPTMQKLIPADSLRLQFYDG TRWQESWSSVQAIPVAVRMTLHSPQWGEIERIWLLRGPQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspJ | YP_854401.1 | type II secretion protein GspJ | Not tested | PAI I APEC-O1 | Protein | 2e-88 | 97 |
| gspJ | CAE85228.1 | GspJ, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 8e-83 | 97 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspJ | YP_001881744.1 | general secretion pathway protein GspJ | VFG2053 | Protein | 1e-84 | 99 |
