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Name : SbBS512_E3405 (SbBS512_E3405) Accession : - Strain : Shigella boydii CDC 3083-94 Genome accession: NC_010658 Putative virulence/resistance : Unknown Product : - Function : - COG functional category : - COG ID : - EC number : - Position : 3167035 - 3168012 bp Length : 978 bp Strand : - Note : general secretion pathway protein K, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error DNA sequence : ATGATCACCTCACCACCAAAACGCGGAATGGCACTGGTCGTGGTGCTGGTATTGCTGGCGGTTATGATGCTGGTAACCAT CACGCTTTCCGGGCGGATGCAGCAACAACTTGGGCGAACGCGCAGCCAGCAGGAGTACCAGCAGGCGCTGTGGTACAGCG CCAGTGCGGAAAGCCTGGCGCTGAGCGCGCTCAGTCTGAGCCTGAAAAATGAAAAGCGCGTGCATCTGGCACAGCCGTGG GCATCCGGCCCTCGTTTCTTCCCTCTGCCGTAGGGGCAAATTGCGGTCACCCTGCGTGACGCACAGGCTTGCTTTAACCT GAATGCCCTTGCTCAGCCGACAACGGCGTCGCGTCCGCTTGCGGTACAACAGTTGATTGCCCTGATCTCGCGCCTGGATG TGCCTGCTTATCGGGCCGAACTGATAGCCGAAAGCCTGTGGGAGTTTATTGACGAGGACCGCAGCGTGCAGACACGTCTG GGCCGTGAAGACAGCGAGTATCTCGCCCGTTCGGTGCCGTTCTACGCCGCCAATCAACCGCTGTCTGATATCAGTGAGAT GCGCGTGGTACAGGGAATGGACGCCGGGCTTTATCAAAAACTGAAACCGCTGGTCTGTGCGCTGCCGATGATCCGCCAGC AAATCAACATCAATACTTTAGACGTCACGCAAAGTGTGATTCTTGAGGCGCTGTTTGACCCGTGGTTAAGCCCCGTTCAG GCGCGGGCGTTATTACAACAACGTCCGGCGAAGGGCTGGGAAGATGTCGATCAGTTTCTTGCACAGCCGCTACTTGCTGA CGTCGATGAGCGTACTAAAAAACAGCTAAAAACCGTCCTGAGCGTGGACAGCAATTACTTCTGGCTGCGTTCAGATATCA CCGTGAATGAGATTGAACTGACGATGAACTCGTTAATTGTCCGCATGGGCCCACAACACTTTTCGGTTCTCTGGCATCAG ACAGGAGAAAGTGAGTGA Protein sequence : - |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspK | CAE85227.1 | GspK, hypothetical type II secretion protein | Not tested | PAI V 536 | DNA | 0.0 | 96.1 |
| gspK | YP_854400.1 | type II secretion protein GspK | Not tested | PAI I APEC-O1 | DNA | 0.0 | 96 |
