|
Name : SbBS512_E2627 (SbBS512_E2627) Accession : YP_001881076.1 Strain : Shigella boydii CDC 3083-94 Genome accession: NC_010658 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : S : Function unknown COG ID : COG5464 EC number : - Position : 2429107 - 2430009 bp Length : 903 bp Strand : + Note : identified by match to protein family HMM PF04754; match to protein family HMM TIGR01784 DNA sequence : ATGACCGAATCAACAACCTCCTCCCCGCATGATGCGGTATTTAAAACCTTTATGTTCACACCCGAAACCGCACGGGATTT TCTCGAAATACATTTACCAGAACCACTGCGCAAGCTTTGCAACCTGCAAACCTTACGCCTGGAACCCACTAGTTTTATTG AAAAAAGTTTACGCGCTTACTACTCGGATGTTTTGTGGTCCGTGGAAACCAGCGACGGTGACGGCTATATCTACTGCGTG ATTGAACATCAAAGCTCTGCAGAAAAGAATATGGCTTTTCGGCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCT GGATAAAGGCTATGACAGAGTTCCGCTGGTGGTGCCATTGCTGTTTTATCATGGCGAAACATCGCCCTACCCGTACTCAC TTAACTGGCTGGATGAGTTTGACGATCCGCAACTTGCCCGGCAGTTGTACACCGAAGCTTTTCCGTTGGTGGATATCACC ATCGTACCTGACGATGAGATCATGCAACATCGGCGTATAGCTCTGCTGGAACTGATTCAAAAGCATATTCGCGACCGCGA TTTAATCGGCATGGTCGACAGGATCACCACGCTTTTGGTTAGAGGCTTCACTAATGACAGCCAGCTACAAACACTGTTTA ATTATCTGCTGCAATGCGGCGATACCTCCCGTTTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAG GAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTATGCATGAACAAGC CATTAAAATTGCTTTGCGCATGCTGGAACAGGGCATTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCG ATCTGGCAGCGAATAACCACTAA Protein sequence : MTESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQTLRLEPTSFIEKSLRAYYSDVLWSVETSDGDGYIYCV IEHQSSAEKNMAFRLMRYATAAMQRHLDKGYDRVPLVVPLLFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFPLVDIT IVPDDEIMQHRRIALLELIQKHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQCGDTSRFTRFIEEIAERSPLQK ERLMTIAERLRQEGHQIGWQEGMHEQAIKIALRMLEQGIDRDQVLAATQLSEADLAANNH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YE3497 | YP_001007658.1 | putative transposase | Not tested | YAPI | Protein | 9e-83 | 56 |
| YpsIP31758_3726 | YP_001402680.1 | transposase | Not tested | YAPI | Protein | 2e-84 | 56 |
| pilW | CAF28495.1 | putative transposase | Not tested | YAPI | Protein | 1e-84 | 56 |
| tnp | AAN64216.1 | transposase | Not tested | necrotizing factor locus | Protein | 1e-81 | 51 |
| PMI2627 | YP_002152329.1 | transposase | Not tested | Not named | Protein | 8e-64 | 46 |
