Gene Information

Name : SbBS512_E2600 (SbBS512_E2600)
Accession : YP_001881054.1
Strain : Shigella boydii CDC 3083-94
Genome accession: NC_010658
Putative virulence/resistance : Unknown
Product : transposase family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2400624 - 2400860 bp
Length : 237 bp
Strand : -
Note : identified by match to protein family HMM PF01527

DNA sequence :
TTGCTGCACGCTTACAGTGAAGGCGCTTCCCGATTATCCCTTCCTGAAGGCACTTTAGGACAATGGGTTACCGCCGCCAG
AAAAGGGCTCGGTACTCCTGGTTCCCGCACGGTGGCTGAACTGGAATCTGAAATTCTGCAACTGCGTAAGGCGTTAAATG
AAGCTCGCCTTGAGCGAGATATATTAAAAAAAGCAACAGCGTATTTTGCACAGGAGTCGCTGAAAAATACGCGTTAA

Protein sequence :
MLHAYSEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3576 NP_755451.1 hypothetical protein Not tested PAI I CFT073 Protein 5e-27 100
hp2 AAC61714.1 Hp2 Not tested PAI I CFT073 Protein 4e-27 100
tnpJ AAD44752.1 TnpJ Not tested SHI-2 Protein 4e-27 100
unnamed AAQ07469.1 TnpJ-like protein Not tested Not named Protein 4e-27 100
unnamed AAF09021.1 unknown Not tested SHI-O Protein 1e-26 99
unnamed AAF09029.1 unknown Not tested SHI-O Protein 1e-26 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SbBS512_E2600 YP_001881054.1 transposase family VFG1707 Protein 1e-27 100