Gene Information

Name : SbBS512_E2190 (SbBS512_E2190)
Accession : YP_001880703.1
Strain : Shigella boydii CDC 3083-94
Genome accession: NC_010658
Putative virulence/resistance : Unknown
Product : ISSd1, transposase orfA/B, fusion
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 1991392 - 1991694 bp
Length : 303 bp
Strand : +
Note : identified by match to protein family HMM PF01527

DNA sequence : 
ATGAGCAGAAAAAACCAACGTTACTCTAAAGAGTTCAAAGCCGAAGCTGTCAGAACGGTTCTTGAAAATCAACTTTCGAT
CAGTGAAGGCGCTTCCCGATTATCCCTTCCTGAAGGCACTTTAGGACAATGGGTTACCGCCGCCAGAAAAGGGCTCGGTA
CTCCTGGTTCCCGCACGGTGGCTGAACTGGAATCTGAAATTCTGCAACTGCGTAAGGCGTTAAATGAAGCTCGCCTTGAG
CGAGATATATTAAAAAAAGCAACAGCGTATTTTGCACAGGAGTCGCTGAAAAATACGCGTTAA

Protein sequence : 
MSRKNQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLE
RDILKKATAYFAQESLKNTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3576 NP_755451.1 hypothetical protein Not tested PAI I CFT073 Protein 9e-40 100
hp2 AAC61714.1 Hp2 Not tested PAI I CFT073 Protein 6e-40 100
tnpJ AAD44752.1 TnpJ Not tested SHI-2 Protein 9e-40 99
unnamed AAQ07469.1 TnpJ-like protein Not tested Not named Protein 9e-40 99
unnamed AAF09021.1 unknown Not tested SHI-O Protein 3e-39 98
unnamed AAF09029.1 unknown Not tested SHI-O Protein 3e-39 98
Z1150 NP_286685.1 hypothetical protein Not tested TAI Protein 1e-33 97
Z1589 NP_287093.1 hypothetical protein Not tested TAI Protein 1e-33 97
EXB21 ABD94708.1 putative transposase Not tested ExoU island B Protein 1e-08 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SbBS512_E2190 YP_001880703.1 ISSd1, transposase orfA/B, fusion VFG1707 Protein 3e-40 100