Gene Information

Name : SbBS512_E2141 (SbBS512_E2141)
Accession : YP_001880665.1
Strain : Shigella boydii CDC 3083-94
Genome accession: NC_010658
Putative virulence/resistance : Unknown
Product : transposase family
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 1948257 - 1948565 bp
Length : 309 bp
Strand : +
Note : identified by match to protein family HMM PF01527

DNA sequence : 
ATGAGCAGAAAAAACCAACGTTACTCTAAAGAGTTCAAAGCCGAAGCTGTCAGAACGGTTCTTGAAAATCAACTTTCGAT
CAGTGAAGGCGCTTCCCGATTATCCCTTCCTGAAGGCACTTTAGGACAATGGGTTACCGCCGCCAGAAAAGGGCTCGGTA
CTCCTGGTTCCCGCACGGTGGCTGAACTGGAATCTGAAATTCTGCAACTGCGTAAGGCGTTAAATGAAGCTCGCCTTGAG
CGAGATATATTAAAAAAAGCAACAGCGTATTTTGGTAAGCGTAAACTGACCGCCGTATGTAGCCATTAA

Protein sequence : 
MSRKNQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLE
RDILKKATAYFGKRKLTAVCSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1150 NP_286685.1 hypothetical protein Not tested TAI Protein 5e-33 97
Z1589 NP_287093.1 hypothetical protein Not tested TAI Protein 5e-33 97
tnpJ AAD44752.1 TnpJ Not tested SHI-2 Protein 1e-36 95
unnamed AAQ07469.1 TnpJ-like protein Not tested Not named Protein 1e-36 95
hp2 AAC61714.1 Hp2 Not tested PAI I CFT073 Protein 7e-37 93
c3576 NP_755451.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-36 93
unnamed AAF09021.1 unknown Not tested SHI-O Protein 3e-36 91
unnamed AAF09029.1 unknown Not tested SHI-O Protein 3e-36 91
EXB21 ABD94708.1 putative transposase Not tested ExoU island B Protein 1e-08 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SbBS512_E2141 YP_001880665.1 transposase family VFG1707 Protein 3e-37 93