Gene Information

Name : SbBS512_E1940 (SbBS512_E1940)
Accession : YP_001880492.1
Strain : Shigella boydii CDC 3083-94
Genome accession: NC_010658
Putative virulence/resistance : Unknown
Product : phage tail protein I
Function : -
COG functional category : R : General function prediction only
COG ID : COG4385
EC number : -
Position : 1773884 - 1774414 bp
Length : 531 bp
Strand : +
Note : identified by match to protein family HMM PF09684; match to protein family HMM TIGR01634

DNA sequence :
ATGAGTAATTCGTTGTTACCACCATCAGCCAGCAATTTCATGCGTTGTGCCGAAGCCGTCGGAACACGCATTACAGACAT
TCCGGTAGACCTCAACACGCTGTGGTCGCCGGACACCTGCCCGGTGCATCTGCTGCCTTATCTCGCCTGGGCGTTTTCCG
TTGACCGCTGGGATCGCAACTGGCCGGAAGAGACAAAGCGACAGGTTATTCGTGATGCATGGCTGATACACCGACACAAA
GGGACCATCAGCGCACTGCGCCGGGCCATTGAGCCGCTGGGATACCTCATTCGCGTGTCTGAGTGGTGGGAGTTCGGCGG
AGAACCGGGAACATTTACCGTTGAAGTCGGCACGCTGGACAGTGGCGTGACGGAGGAAATGTATCTGGAAATGGAGCGGT
TGATTGCTGATGCCCGCCCGGTCAGCCGCCACATGACAGGGCTGAATATCATTCAGGAAATTCCGGGGGATATTTTCGCA
GCGGCGGCAACTTATGACGGTGAAGTTATTACCATTTATCCAGGCGATTAA

Protein sequence :
MSNSLLPPSASNFMRCAEAVGTRITDIPVDLNTLWSPDTCPVHLLPYLAWAFSVDRWDRNWPEETKRQVIRDAWLIHRHK
GTISALRRAIEPLGYLIRVSEWWEFGGEPGTFTVEVGTLDSGVTEEMYLEMERLIADARPVSRHMTGLNIIQEIPGDIFA
AAATYDGEVITIYPGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4612 NP_458694.1 putative phage tail protein Not tested SPI-7 Protein 8e-46 56
t4306 NP_807902.1 phage tail protein Not tested SPI-7 Protein 8e-46 56
unnamed ABR13481.1 hypothetical protein Not tested PAGI-6 Protein 4e-39 55