Gene Information

Name : SbBS512_E1938 (SbBS512_E1938)
Accession : YP_001880491.1
Strain : Shigella boydii CDC 3083-94
Genome accession: NC_010658
Putative virulence/resistance : Unknown
Product : phage baseplate assembly protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3628
EC number : -
Position : 1772640 - 1772990 bp
Length : 351 bp
Strand : +
Note : identified by match to protein family HMM PF04965

DNA sequence :
GTGACAACCCGCTACACAGGAATGAACCCGGACGGAACGGGAAACCTGAACGATATGGAGCACCTGAAACAGTCAGTCAG
GGACATCCTGACCACCCCGCTGGCAAGCCGGGTTATGCGACGGGAATATGGCAGCCTTGTGCCTGATTTGATTGACGAAC
CCATGAATAACACCACGCGTCTGCAATGCATGAGTGCTGCCGTGATTGCGCTGACACGATGGGAACCCCGCATTGCCCTG
GACGCTATCGACGTTGTCTGGAAGGCAGGAGGCCGCGCCGGGGTGACGCTGTCGGGCACTGTCATGCAGACCATGCAGAA
TGTTGAATTAACCATCACGCTGAGGGAGTAA

Protein sequence :
MTTRYTGMNPDGTGNLNDMEHLKQSVRDILTTPLASRVMRREYGSLVPDLIDEPMNNTTRLQCMSAAVIALTRWEPRIAL
DAIDVVWKAGGRAGVTLSGTVMQTMQNVELTITLRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4614 NP_458696.1 phage baseplate assembly protein Not tested SPI-7 Protein 2e-19 52
t4308 NP_807904.1 phage baseplate assembly protein Not tested SPI-7 Protein 2e-19 52
unnamed ABR13479.1 predicted baseplate Not tested PAGI-6 Protein 2e-18 42