Gene Information

Name : SbBS512_E1714 (SbBS512_E1714)
Accession : YP_001880292.1
Strain : Shigella boydii CDC 3083-94
Genome accession: NC_010658
Putative virulence/resistance : Unknown
Product : ISSd1, transposase orfA/B, fusion
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 1557095 - 1557397 bp
Length : 303 bp
Strand : -
Note : identified by match to protein family HMM PF01527

DNA sequence :
ATGAGCAGAAAAAACCAACGTTACTCTAAAGAGTTCAAAGCCGAAGCTGTCAGAACGGTTCCTGAAAATCAACTTTCGAT
CAGTGAAGGCGCTTCCCGATTATCCCTTCCTGAAGGCACTTTAGGACAATGGGTTACCGCCGCCAGAAAAGGGCTCGGTA
CTCCTGGTTCCCGCACGGTGGCTGAACTGGAATCTGAAATTCTGCAACTGCGTAAGGCGTTAAATGAAGCTCGCCTTGAG
CGAGATATATTAAAAAAAGCAACAGCGTATTTTGCACAGGAGTCGCTGAAAAATACGCGTTAA

Protein sequence :
MSRKNQRYSKEFKAEAVRTVPENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLE
RDILKKATAYFAQESLKNTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hp2 AAC61714.1 Hp2 Not tested PAI I CFT073 Protein 4e-39 99
c3576 NP_755451.1 hypothetical protein Not tested PAI I CFT073 Protein 6e-39 99
tnpJ AAD44752.1 TnpJ Not tested SHI-2 Protein 7e-39 98
unnamed AAQ07469.1 TnpJ-like protein Not tested Not named Protein 7e-39 98
unnamed AAF09021.1 unknown Not tested SHI-O Protein 2e-38 97
unnamed AAF09029.1 unknown Not tested SHI-O Protein 2e-38 97
Z1150 NP_286685.1 hypothetical protein Not tested TAI Protein 9e-33 96
Z1589 NP_287093.1 hypothetical protein Not tested TAI Protein 9e-33 96
EXB21 ABD94708.1 putative transposase Not tested ExoU island B Protein 5e-08 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SbBS512_E1714 YP_001880292.1 ISSd1, transposase orfA/B, fusion VFG1707 Protein 2e-39 99