Gene Information

Name : SbBS512_E1708 (SbBS512_E1708)
Accession : YP_001880286.1
Strain : Shigella boydii CDC 3083-94
Genome accession: NC_010658
Putative virulence/resistance : Unknown
Product : transposase family
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 1553770 - 1554033 bp
Length : 264 bp
Strand : +
Note : identified by match to protein family HMM PF01527

DNA sequence :
ATGAGCAGAAAAAACCAACGTTACTCTAAAGAGTTCAAAGCCGAAGCTGTCAGAACGGTTCCTGAAAATCAACTTTCGAT
CAGTGAAGGCGCTTCCCGATTATCCCTTCCTGAAGGCACTTTAGGACAATGGGTTACCGCCGCCAGAAAAGGGCTCGGTA
CTCCTGGTTCCCGCACGGTGGCTGAACTGGAATCTGAAATTCTGCAACTGCGTAAGGCGTTAAATGAAGCTCGCCTTTGT
GATGCTGCCAACTTACTGATTTAG

Protein sequence :
MSRKNQRYSKEFKAEAVRTVPENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLC
DAANLLI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hp2 AAC61714.1 Hp2 Not tested PAI I CFT073 Protein 1e-29 99
c3576 NP_755451.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-29 99
tnpJ AAD44752.1 TnpJ Not tested SHI-2 Protein 2e-29 98
unnamed AAQ07469.1 TnpJ-like protein Not tested Not named Protein 2e-29 98
unnamed AAF09029.1 unknown Not tested SHI-O Protein 7e-29 97
unnamed AAF09021.1 unknown Not tested SHI-O Protein 7e-29 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SbBS512_E1708 YP_001880286.1 transposase family VFG1707 Protein 6e-30 99