Name : SbBS512_E1609 (SbBS512_E1609) Accession : YP_001880199.1 Strain : Shigella boydii CDC 3083-94 Genome accession: NC_010658 Putative virulence/resistance : Virulence Product : chelated iron transport system membrane protein yfeD Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1108 EC number : - Position : 1463629 - 1464486 bp Length : 858 bp Strand : - Note : identified by similarity to SP:Q56955; match to protein family HMM PF00950 DNA sequence : ATGATGGCATTATTACTGGAGCCACTGCAGTTCACCTTTATGAGTCACGCACTGCTGATTTCACTGGTAGTTTCCATACC CTGTGCGCTGCTGTCGGTCTTTCTGGTCCTGAAAGGTTGGGCACTGATGGGTGACGCGATGAGTCATGCGGTTTTTCCTG GCATCGTGCTTACCTGGATTCTGGGGTTACCTCTGGCTACAGGGGCATTCGTCGCCGGAGTATTCTGCGCGGTGGCGACG GGATACCTGAAAGACAACAGCCGAATCAAGCAAGATACAGTTATGGGGATTGTTTTTTCTGGCATGTTTGCCGCAGGTCT GATCTTGTATATTGCAATCAAACCAGACGTACATCTTGACCATATTCTTTTCGGCGACATGCTCGGGATAACCATCGGCG ATATAATCCAGACGGTGATTATTGCCGGGCTGGTTACACTTGTTATTAGCGTAAAATGGCGGGATTTTTTGCTGTTCAGC TTTGATTATCAACAGGCGCAGGTAAGCGGTTTGCATACGAGATGGCTGCATTATGGGCTGCTGTGCATGGTTTCCCTGAC CATTGTGGCGACGCTGAAAGCAGTAGGTATCATTCTCTCTATTTCTCTGCTCATTGCGCCTGGCGCCATTGCAGTACTCC TGACACAACGCTTTCATATTGCGCTCCTACTGGCGACTGGCATATCGGTAATAGTGTCAATGACTGGTGTCTGGCTGTCC TTTTTTATCGACAGCGCACCAGCTCCGACGATTGTCGTCTTATTCGCGGTCGTGTTCATCATGACGTTTACCGTTACCAG CATCAACGCACGCACAAAGGGAAACGCCCATACACAGGATCTGTTATCACCCAATTAG Protein sequence : MMALLLEPLQFTFMSHALLISLVVSIPCALLSVFLVLKGWALMGDAMSHAVFPGIVLTWILGLPLATGAFVAGVFCAVAT GYLKDNSRIKQDTVMGIVFSGMFAAGLILYIAIKPDVHLDHILFGDMLGITIGDIIQTVIIAGLVTLVISVKWRDFLLFS FDYQQAQVSGLHTRWLHYGLLCMVSLTIVATLKAVGIILSISLLIAPGAIAVLLTQRFHIALLLATGISVIVSMTGVWLS FFIDSAPAPTIVVLFAVVFIMTFTVTSINARTKGNAHTQDLLSPN |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
sitD | NP_806467.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 3e-76 | 68 |
sitD | NP_461785.1 | permease | Virulence | SPI-1 | Protein | 2e-76 | 68 |
sitD | AAD41068.1 | SitD | Virulence | centisome 63 pathogenicity island | Protein | 1e-76 | 68 |
sitD | YP_217784.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 4e-76 | 68 |
sitD | NP_457258.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 3e-76 | 68 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
SbBS512_E1609 | YP_001880199.1 | chelated iron transport system membrane protein yfeD | BAC0352 | Protein | 8e-77 | 68 |
SbBS512_E1609 | YP_001880199.1 | chelated iron transport system membrane protein yfeD | BAC0442 | Protein | 6e-56 | 52 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
SbBS512_E1609 | YP_001880199.1 | chelated iron transport system membrane protein yfeD | VFG0528 | Protein | 7e-77 | 68 |