Gene Information

Name : SbBS512_E1608 (SbBS512_E1608)
Accession : YP_001880198.1
Strain : Shigella boydii CDC 3083-94
Genome accession: NC_010658
Putative virulence/resistance : Unknown
Product : transposase family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1462880 - 1463311 bp
Length : 432 bp
Strand : +
Note : -

DNA sequence :
TTGTCTAATTCGTCAGATTCTGACCAGACGGTTCAGGCTGTACGCTTACAGTTGATGCAGTCGTTGTACGACTGGATACA
GTTGCAGAGGAAAACGCTGTCGAAACATGCGGAGATGGCGAAGGCGTTCGACTATATCCTGAATCACTGGAATGCGCTGA
ACGAGTTCTGTCGTGACGGCTGGGTGGAAATAGACAACAACATCGGTGAAAACGCGTTACGATCGGTGGCGGTTGGAAGA
AAAAATTATCTCTTTTTCGGCTCAGACAAGGGAGGAGAAAGTGCGGCGATCATCTACAGTCTGCTGGTCACCTGCAAACA
GAACGAAGTGGAGCCGGAGGACTGGTTGCGCGAAGTGATCGAGAAGCTCAATGACTGGCCGTCGAACCAAGTGCATGAAC
TGCTGCCCTGGAACTTCTCGTCTGTAAAATAA

Protein sequence :
MSNSSDSDQTVQAVRLQLMQSLYDWIQLQRKTLSKHAEMAKAFDYILNHWNALNEFCRDGWVEIDNNIGENALRSVAVGR
KNYLFFGSDKGGESAAIIYSLLVTCKQNEVEPEDWLREVIEKLNDWPSNQVHELLPWNFSSVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SF2970 NP_708744.1 hypothetical protein Not tested SHI-1 Protein 5e-31 62
unnamed AAK00461.1 unknown Not tested SHI-1 Protein 4e-31 62
unnamed CAD42054.1 hypothetical protein Not tested PAI II 536 Protein 1e-28 62
l0015 CAD33721.1 putative IS protein Not tested PAI I 536 Protein 3e-34 59
Z1158 NP_286693.1 hypothetical protein Not tested TAI Protein 4e-18 43
Z1597 NP_287101.1 hypothetical protein Not tested TAI Protein 4e-18 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SbBS512_E1608 YP_001880198.1 transposase family VFG0632 Protein 1e-31 62
SbBS512_E1608 YP_001880198.1 transposase family VFG1573 Protein 4e-29 62
SbBS512_E1608 YP_001880198.1 transposase family VFG1462 Protein 1e-34 59