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Name : SbBS512_E1606 (SbBS512_E1606) Accession : YP_001880196.1 Strain : Shigella boydii CDC 3083-94 Genome accession: NC_010658 Putative virulence/resistance : Unknown Product : IS66 family element, transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3436 EC number : - Position : 1460747 - 1462063 bp Length : 1317 bp Strand : - Note : identified by match to protein family HMM PF03050 DNA sequence : ATGAGCGGCTCACTTCCTGACGATATCAATGCACTGAAACGTCTCCTTGCCGAACAGGAGGCGCTGAACCGTGCCCTGCT GGAAAAGCTGAACGAGCGTGAACGCGAAATAGACCATCTGCAGGCACAGCTGGATAAGCTGCGCCGGATGAACTTCGGCA GCCGCTCCGAAAAAGTCTCCCGTCGTATCGCACAGATGGAAGCTGACCTGAAGGCACTTCAGAAAGAAAGTGATACCCTT ACCGGTCGGGTTGACGACCCGGCCGTGCAGCGCCCGCTGCGTCAAACCCGCACCCGCAAACCGTTCCCCGAATCACTCCC CCGCGATGAAAAACGGCTGCTGCCGGCAGCGTCATGCTGCCCGGAATGTGGAGGCTCACTGAGCTATCTGGGTGAGGATG CCGCCGAACAGCTGGAGTTGATGCGCAGCGTCTTCCGGGTTATCCGGACTGTACGTGAAAAGCATGCCTGTACTCAGTGC GATGCCATCGTGCAGGCCCCCGCGCCTTCACGGCCCATCGAGCGGGGTATCGCAGGACCGGGGCTGCTGGCCCGCGTGCT GATCTCAAAGTATGCAGAGCACACCCCGCTGTACCGCCAGTCTGAAATGTACGGCCGCCAGGGCGTGGAGCTGAGTCGTT CACTGCTGTCGGGCTGGGTGGATGCATGCTGCCGGCTACTGTCACCGCTGGAAGAAGCGCTTCAGGACTATGTGCTGACT GACGGTAAGCTCCATGCTGATGACACGCCTGTCCCGGTGCTGTTGCCAGGCAATAAGAAAACGAAGACCGGGCGGTTATG GACCTACGTTCGTGACGACCGTAACGCCGGGTCAACGCTGGCGCCGGCGGTGTGGTTCGCTTACAGCCCGGACAGAAAAG GCATCCATCCGCAGACCCATCTTGCGGGGTTCAGTGGTGTACTGCAGGCGGATGCATACGCCGGGTTCAACGAGCTGTAC CGGGATGGCCGGATAACGGAAGCCGCCTGTTGGGCTCACGCCCGCCGTAAAATCCACGATGTGCACGTTCGCACCCCGTC AGCCCTGACGGAGGAAGCGCTGAAACGGATCGGCGAACTGTACGCCATCGAGGCAGAGATAAGGGGAATGACGGCGGAGC AGCGCCTTGCCGAACGTCAGTTGAAAACGAAACCGCTGCTGAAATCCCTGGAAAGCTGGCTGCGTGAAAAGATGAAAACC CTGTCGCGACACTCAGAACTGGCGAAAGCGTTCGCATACGCCCTGAAGTGGTCAACAAAAACTGGCCACCGAGTTAGAGT TTTTCCAGTATCGATTTTCCGATTCGTTTGGGGGTAA Protein sequence : MSGSLPDDINALKRLLAEQEALNRALLEKLNEREREIDHLQAQLDKLRRMNFGSRSEKVSRRIAQMEADLKALQKESDTL TGRVDDPAVQRPLRQTRTRKPFPESLPRDEKRLLPAASCCPECGGSLSYLGEDAAEQLELMRSVFRVIRTVREKHACTQC DAIVQAPAPSRPIERGIAGPGLLARVLISKYAEHTPLYRQSEMYGRQGVELSRSLLSGWVDACCRLLSPLEEALQDYVLT DGKLHADDTPVPVLLPGNKKTKTGRLWTYVRDDRNAGSTLAPAVWFAYSPDRKGIHPQTHLAGFSGVLQADAYAGFNELY RDGRITEAACWAHARRKIHDVHVRTPSALTEEALKRIGELYAIEAEIRGMTAEQRLAERQLKTKPLLKSLESWLREKMKT LSRHSELAKAFAYALKWSTKTGHRVRVFPVSIFRFVWG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| st57 | CAC81895.1 | ST57 protein | Not tested | LEE II | Protein | 5e-161 | 92 |
| l0015 | CAD33775.1 | L0015 protein | Not tested | PAI I 536 | Protein | 5e-150 | 91 |
| Z4337 | NP_289562.1 | hypothetical protein | Not tested | OI-122 | Protein | 3e-175 | 90 |
| Z5098 | NP_290249.1 | prophage-associated protein | Not tested | LEE | Protein | 3e-175 | 90 |
| ECs4547 | NP_312574.1 | hypothetical protein | Not tested | LEE | Protein | 2e-175 | 90 |
| unnamed | CAC39285.1 | hypothetical protein | Not tested | LPA | Protein | 2e-175 | 90 |
| unnamed | AAC31494.1 | L0015 | Not tested | LEE | Protein | 2e-175 | 90 |
| unnamed | ACU09439.1 | IS66 family element transposase | Not tested | LEE | Protein | 2e-175 | 90 |
| tnp | AEA34686.1 | transposase | Not tested | Not named | Protein | 3e-176 | 90 |
| Z1131 | NP_286666.1 | hypothetical protein | Not tested | TAI | Protein | 2e-174 | 90 |
| Z1570 | NP_287074.1 | hypothetical protein | Not tested | TAI | Protein | 2e-174 | 90 |
| unnamed | CAI43806.1 | hypothetical protein | Not tested | LEE | Protein | 1e-174 | 90 |
| unnamed | AAL57570.1 | unknown | Not tested | LEE | Protein | 4e-175 | 90 |
| unnamed | AAL08460.1 | unknown | Not tested | SRL | Protein | 2e-167 | 87 |
| s0025 | CAD33772.1 | IS66-like transposase | Not tested | PAI I 536 | Protein | 4e-100 | 63 |
| Z4340 | NP_289564.1 | hypothetical protein | Not tested | OI-122 | Protein | 2e-115 | 63 |
| Z1161 | NP_286696.1 | hypothetical protein | Not tested | TAI | Protein | 5e-119 | 63 |
| Z1600 | NP_287104.1 | hypothetical protein | Not tested | TAI | Protein | 5e-119 | 63 |
| tnp | AEA34687.1 | IS66 family transposase | Not tested | Not named | Protein | 2e-102 | 59 |
| aec53 | AAW51736.1 | Aec53 | Not tested | AGI-3 | Protein | 3e-112 | 58 |
| ECO103_3554 | YP_003223421.1 | hypothetical protein | Not tested | LEE | Protein | 3e-111 | 57 |
| Z4317 | NP_289543.1 | hypothetical protein | Not tested | OI-122 | Protein | 4e-111 | 56 |
| BCAM0248 | YP_002232880.1 | putative transposase | Not tested | BcenGI11 | Protein | 9e-107 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SbBS512_E1606 | YP_001880196.1 | IS66 family element, transposase | VFG1516 | Protein | 3e-150 | 91 |
| SbBS512_E1606 | YP_001880196.1 | IS66 family element, transposase | VFG0793 | Protein | 1e-175 | 90 |
| SbBS512_E1606 | YP_001880196.1 | IS66 family element, transposase | VFG1051 | Protein | 1e-167 | 87 |
| SbBS512_E1606 | YP_001880196.1 | IS66 family element, transposase | VFG1736 | Protein | 2e-117 | 64 |
| SbBS512_E1606 | YP_001880196.1 | IS66 family element, transposase | VFG1513 | Protein | 2e-100 | 63 |
