|
Name : gluQ (SbBS512_E0135) Accession : YP_001878947.1 Strain : Shigella boydii CDC 3083-94 Genome accession: NC_010658 Putative virulence/resistance : Unknown Product : glutamyl-Q tRNA(Asp) synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0008 EC number : 6.1.1.- Position : 146256 - 147182 bp Length : 927 bp Strand : - Note : this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the DNA sequence : ATGCTCCCGCCTTATTTTTTGTTCAAAGAGATGACAGACACACAGTATATTGGCCGCTTCGCCCCCTCTCCTTCCGGCGA GCTTCATTTTGGCTCTCTGATCGCCGCGCTCGGCAGCTATTTGCAGGCTCGCGCCCGGCAAGGTCGCTGGCTGGTACGCA TAGAAGATATCGACCCGCCTCGTGAAGTTCCCGGTGCCGCAGAAACTATCCTGCGCCAGCTGGAACATTACGGTCTGCAC TGGGACGGCGATGTTCTCTGGCAATCGCAACGTCACGACGCCTATCGTGAAGCACTCGCCTGGTTACATGAACAAGGACT AAGTTATTACTGCACCTGTACGCGTGCGCGTATTCAAAGCATTGTCGGTATTTACGACGGTCATTGCCGGGTGTTGCATC ATGGACCAGACAACGCCGCAGTGCGTATCCGCCAGCAGCATCCGGTCACGCAATTTACTGACCAGCTGCGCGGCATTATT CACGCCGACGAAAAACTGGCACGGGAAGATTTTATCATTCATCGCCGTGATGGGTTGTTCGCCTACAACCTGGCTGTTGT GGTTGATGATCATTTCCAGGGCGTTACAGAAATAGTGCGTGGGGCTGATCTGATTGAACCAACAGTAAGGCAAATCTCGC TGTACCAGCTTTTTGGCTGGAAAGTGCCAGATTACATTCATCTGCCGCTGGCGCTTAATCCACAAGGCGCTAAACTTTCC AAGCAGAATCATGCGCCTGCGTTGCCGAAAGGCGATCCACGCCCGGTACTAATCGCGGCACTTCAATTTCTGGGGCAGCT GGCAGAAGCACACTGGCAGGATTTCAGCGTCGAGCAAATCCTTCAGTCAGCCGTCAAAAACTGGACGCTGACCGCCGTGC CCGAGTCGGCAATTGTAAATTCAACATTCTCAAATGCGTCATGCTGA Protein sequence : MLPPYFLFKEMTDTQYIGRFAPSPSGELHFGSLIAALGSYLQARARQGRWLVRIEDIDPPREVPGAAETILRQLEHYGLH WDGDVLWQSQRHDAYREALAWLHEQGLSYYCTCTRARIQSIVGIYDGHCRVLHHGPDNAAVRIRQQHPVTQFTDQLRGII HADEKLAREDFIIHRRDGLFAYNLAVVVDDHFQGVTEIVRGADLIEPTVRQISLYQLFGWKVPDYIHLPLALNPQGAKLS KQNHAPALPKGDPRPVLIAALQFLGQLAEAHWQDFSVEQILQSAVKNWTLTAVPESAIVNSTFSNASC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00313 | YP_008207778.1 | Glutamyl- and glutaminyl-tRNA synthetase | Not tested | AbaR25 | Protein | 2e-54 | 45 |
| BJAB0868_00317 | YP_008211643.1 | Glutamyl- and glutaminyl-tRNA synthetase | Not tested | AbaR26 | Protein | 2e-54 | 45 |
