Gene Information

Name : umuD (SbBS512_E1340)
Accession : YP_001879965.1
Strain : Shigella boydii CDC 3083-94
Genome accession: NC_010658
Putative virulence/resistance : Unknown
Product : DNA polymerase V subunit UmuD
Function : -
COG functional category : K : Transcription
COG ID : COG1974
EC number : 3.4.21.-
Position : 1218355 - 1218774 bp
Length : 420 bp
Strand : +
Note : binds with UmuC protein to form functional DNA pol V (UmuD'2UmuC); involved in translesion polymerization

DNA sequence :
ATGTTGTTTATCAAGCCTGCGGATCTCCGCGAAATTGTGACTTTTCCGCTATTTAGCGATCTTGTTCAGTGTGGCTTTCC
TTCACCGGCAGCAGATTACGTCGAACAGCGCATCGATCTGAATCAACTGTTGATCCAGCATCCCAGCGCGACTTACTTCG
TCAAAGCAAGTGGTGATTCTATGATTGATGGTGGAATTAGTGACGGTGATTTACTGATTGTCGATAGCGCTATTACCGCC
AGCCATGGTGATATTGTCATCGCTGCTGTTGACGGCGAGTTTACGGTGAAAAAATTGCAACTACGCCCGACGGTACAGCT
TATTCCCATGAACAGTGCGTACTCGCCCATTACCATCAGTAGCGAAGATACGCTGGATGTCTTTGGTGTGGTGATCCACG
TCGTTAAGGCGATGCGCTGA

Protein sequence :
MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITA
SHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t06650 YP_006892470.1 hypothetical protein Not tested SPI-7 Protein 2e-18 55
unnamed ABR13390.1 hypothetical protein Not tested PAGI-5 Protein 5e-11 48
rulA CAI36138.1 SOS-response transcriptional repressor Not tested PPHGI-1 Protein 5e-09 42