Gene Information

Name : SbBS512_E1232 (SbBS512_E1232)
Accession : YP_001879874.1
Strain : Shigella boydii CDC 3083-94
Genome accession: NC_010658
Putative virulence/resistance : Virulence
Product : HTH-type transcriptional regulator MlrA
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 1136408 - 1136947 bp
Length : 540 bp
Strand : -
Note : -

DNA sequence : 
TTGCTGAAACCGCAACGGACAGACGGCGGTCATCGGCTGTTCAACGATGCCGATATTGACCGGATCCGCGAGATCAAACG
CTGGATCGACAACGGCGTGCAGGTCAGCAAAGTTAAAATGCTGCTCAGTAATGAAAATGTTGATGTGCAGAACGGCTGGC
GCGATCAGCAAGAAACATTACTGACTTACTTGCAAAGCGGCAATCTGCATAGCCTGCGAACGTGGATCAAAGAGCGCGGT
CAGGATTACCCCGCCCAGACGCTCACCACGCATTTGTTTATTCCTCTGCGTCGACGGCTTCAGTGCCAACAACCGACTCT
CCAGGCGCTGCTGGCGATCCTCGACGGCGTACTGATCAACTACATCGCCATCTGTCTGGCTTCGGCACGTAAAAAACAGG
GTAAAGATGCGCTGGTGGTTGGCTGGAATATTCACGATACCACCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAA
GGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATGTAAGGCAGTATGACTTTCCGTGA

Protein sequence : 
MLKPQRTDGGHRLFNDADIDRIREIKRWIDNGVQVSKVKMLLSNENVDVQNGWRDQQETLLTYLQSGNLHSLRTWIKERG
QDYPAQTLTTHLFIPLRRRLQCQQPTLQALLAILDGVLINYIAICLASARKKQGKDALVVGWNIHDTTRLWLEGWIASQQ
GWRIDVLAHSLNVRQYDFP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf242 NP_460355.1 regulatory protein Not tested SPI-2 Protein 6e-32 42
ORF 242 CAB37409.1 - Not tested SPI-2 Protein 4e-32 42
STY1730 NP_456138.1 putative transcriptional regulator Not tested SPI-2 Protein 4e-32 41
t1258 NP_805061.1 transcriptional regulator Not tested SPI-2 Protein 4e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SbBS512_E1232 YP_001879874.1 HTH-type transcriptional regulator MlrA VFG0491 Protein 2e-32 42