Gene Information

Name : SbBS512_0038 (SbBS512_0038)
Accession : YP_001878806.1
Strain :
Genome accession: NC_010657
Putative virulence/resistance : Unknown
Product : type IV secretion system VirB5 component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 22590 - 23306 bp
Length : 717 bp
Strand : +
Note : identified by match to protein family HMM PF07996

DNA sequence :
ATGAAACGTGTAAAAACATTTATGCTGATATCATTATTGACGGCTTCATTTTATAGCAGCGCAGGTATTCCGGTTGCTGT
AGATGCCAGTCCGGAATGGGCTGTTGAAGCCGCAAGATGGACAGAACGACTCAAACAATGGTCCGAAACTGCGAAACATT
ATCAGGGTCAGATTCAGGCATATAAAGACCAGTTAGCCACGGCAACAGGTATAAGGAATATTGCGGCATTCACAAATGAA
CTAAGTAATCTGCAATCAGAACTGACAAATATTTATAAGCAGGGGAACAGTTATATTTCTGATTTTACCAGTAATCCCGA
AGGTGCATTAAGCAGCCAGGCTAAAAATCTGTTCAGCAAGTATGGAGCCTTTGATATGTGTAATACGGGCTATGAACGTA
ATGATAATCTCTGTAAAGCACGGATTGTGTCAACGGCTGCCAGTATTGAACAGGGAAATGAGATCAATAAGCAGTTATCA
AGTGCAATGTCTCAGATTCAGAGTTTAAGTAGCCGAATTGAGGCTTCAAAGGATATCAAAGAATCCCAGGATTTGGCTAA
CGCATTACAGGCGCAGTCGTTAAAAATGCAGGCGATAAAAATGCAGTATGATGTCTGGAATAATAAAAATAAAGCAGATC
ATGAGATGTTGCTCACACATGAACAAGAGGCCTTTATTAAACAGCAGAAAGAAGCTGAACCATTAACTTTTGATTAA

Protein sequence :
MKRVKTFMLISLLTASFYSSAGIPVAVDASPEWAVEAARWTERLKQWSETAKHYQGQIQAYKDQLATATGIRNIAAFTNE
LSNLQSELTNIYKQGNSYISDFTSNPEGALSSQAKNLFSKYGAFDMCNTGYERNDNLCKARIVSTAASIEQGNEINKQLS
SAMSQIQSLSSRIEASKDIKESQDLANALQAQSLKMQAIKMQYDVWNNKNKADHEMLLTHEQEAFIKQQKEAEPLTFD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP70285.1 Pilx5/VirB5-like protein Not tested HPI Protein 1e-30 42