Gene Information

Name : Amuc_0335 (Amuc_0335)
Accession : YP_001876955.1
Strain : Akkermansia muciniphila ATCC BAA-835
Genome accession: NC_010655
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 394158 - 394904 bp
Length : 747 bp
Strand : -
Note : PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rxy:Rxyl_0848 ABC transporter

DNA sequence : 
ATGAGTTCCCCCGTCATTTCCGTCAGCCATCTCAAGCGCGGTTTCAAATCCGGTTCCGGGAGTATAACTGTGCTGAAAGA
TATCAGCCTTACCGTGAACCGGGGAGAGTTCGTCGCCGTGATGGGCGCAAGCGGCTCCGGAAAAAGTACTCTGCTGAACG
TGCTGGGAGGGCTGCTGGCTCCGGATTCCGGCACGGTGACGGTGGATGGGATGGATCTCGGTTCCATGTCGGATGCCTCC
CTGACGGTGTACCGGCGGGACCGTGTAGGGTTCATTTTCCAGATGTTTAACCTGGTGGGCACCTTGAACGTGGAGGAAAA
CATTCTGTTGCCGTCCCTGGCGGGAGGCAGGAGGGTGGCTCCCGCCGCCCTGGACGCCATGATTGAAAAGGTTGGACTGT
CTCACCGTCGGCATGCCATGCCTGATACGCTCAGCGGCGGGGAGCAGCAGCGCGTGGCGATTGCCCGTGCATTGGTCTCC
GGTCCCGCTCTGGTGCTGGCGGATGAGCCTACGGGCAACCTGGATTCTGAAAATACCCGGCTTATGGGAGATTTGTTCCG
GGATTTGCATCGTGCGCAAGGTTGTGCTTTTGTCCTGGTGACGCATGCGCCGGACGTAGCCATGTGGGCGGATCGTGTAA
TCGTACTCAAGGACGGCAGCATTGTGGACGACAGATCCACAGCGGAATTTGCCGGTCCTGCGGAATTGTCCTCCTTCTAT
GAACGTACGCTGAATGACGCCTTATGA

Protein sequence : 
MSSPVISVSHLKRGFKSGSGSITVLKDISLTVNRGEFVAVMGASGSGKSTLLNVLGGLLAPDSGTVTVDGMDLGSMSDAS
LTVYRRDRVGFIFQMFNLVGTLNVEENILLPSLAGGRRVAPAALDAMIEKVGLSHRRHAMPDTLSGGEQQRVAIARALVS
GPALVLADEPTGNLDSENTRLMGDLFRDLHRAQGCAFVLVTHAPDVAMWADRVIVLKDGSIVDDRSTAEFAGPAELSSFY
ERTLNDAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-36 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-38 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-38 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-38 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Amuc_0335 YP_001876955.1 ABC transporter CP001581.1.gene798.p Protein 2e-45 47
Amuc_0335 YP_001876955.1 ABC transporter NC_008702.1.4606598. Protein 1e-33 44
Amuc_0335 YP_001876955.1 ABC transporter CP001581.1.gene598.p Protein 4e-42 43
Amuc_0335 YP_001876955.1 ABC transporter NC_012469.1.7686878. Protein 7e-42 42
Amuc_0335 YP_001876955.1 ABC transporter NC_012469.1.7685735. Protein 2e-35 41