Gene Information

Name : Amuc_1840 (Amuc_1840)
Accession : YP_001878438.1
Strain : Akkermansia muciniphila ATCC BAA-835
Genome accession: NC_010655
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 2236215 - 2238038 bp
Length : 1824 bp
Strand : +
Note : PFAM: thiamine biosynthesis protein ThiC; KEGG: azo:azo0840 thiamine biosynthesis protein ThiC

DNA sequence :
ATGAACGATACCTCCAATTTGTCTTATCCCGGTTCCCGCCGCATTTATGTTCCGGGCCGTCTGTACCCGGATGTTCGGGT
TCCCATGAGGGAAATCATTTTGGGCGATACCTTGTTGCCCGACGGCACCGCCCACCCTAATGACCCGGTGCGCGTGTACG
ATTGCTCCGGCCCCTGGGGGGACGCTGCTTATGAGGGAACTGCGGAGGAGGGGCTTCCCTCCCTGCGTGCCGCCTGGATA
CGGGCCCGCGGGGATGTGAAAGAGGATGTGGGGCACGAGCGCACCCTGCGTGCTGCGGGCAAGACGCCTGTGACACAGCG
TTATTACGCCCAACAGGGCGTCATTACGCCGGAAATGGAATTTGTCGCCATCCGGGAAAATCTGGGCAGGGAACAGGCTT
TCAAGGCGATATACGACCGCTATCCAAATGCCAAGAGCCGCCCGGACGAAGCTGCGGAAGCCCTGGAAACGCTCACCATG
ATGCCGCGTCCGTCCGAATTGGAGGCGCAGGAGGGATTTGGGCCGTCCAGCATGGTGGCCCGCGACCGCCTGGATCACCA
GCATGCCCCGGAACGCCGGAACGGCTGCCGCATGCCTGCCTACTTTACGCCGGAATTCGTCAGGGATGAAATTGCCTCCG
GCCGTGCGCTGATTCCCGCCAACATCAATCATCCGGAATGTGAGCCGATGGCTATCGGCCGCAATTTCCTGGTAAAAATC
AACGCCAACATAGGCAACTCCGCGCTGGGATCCAGCATTGAGGAGGAGGTGGAAAAGCTGCGCTGGGCCATTCACTGGGG
GGCGGATACCGTTATGGACCTGTCCACCGGGAAGAATATCCACGCGACGAGGGAATGGATTTTAAGAAACTCCCCTGTCC
CCATCGGTACTGTTCCCATTTACCAGGCTCTGGAAAAGGTGGGAGGAAAGGTGGCTGACCTGAGTTGGGAGGTTTTTCGC
GATACCCTGCTTGAACAGGCCCGCCAGGGCGTGGACTATGTGACGGTGCACGCCGCCCTTCTGCTCAGGTTCGTGAACCA
TACGGCGCGGCGCATGACGGGCATCGTTTCCCGCGGCGGTTCCATCATGGCGCAGTGGAGCATGATCCACGAACAGGAAA
ATTTCCTTTATTCCCATTGGGATGAAATTTGTTCCATTCTGGCGGCTTACGATATTGCCGTCTCCATCGGGGATGGCCTG
CGGCCCGGTTCCGTGGCGGACGCCAACGACTTCGCCCAGCTGGCGGAGCTGGAAGTGCAGGGGGATTTGACCATGCGCGC
GTGGAAAGCGGGCGTGCAGGTCATGAATGAAGGCCCCGGCCACGTTCCCATGCACCTTATTAGGGAGAACATGAGCAAGC
AGCTGGAATGGTGCATGGAAGCGCCCTTTTACACGCTGGGGCCGCTGGTAACGGACATCGCCCCCGGTTACGACCATATT
ACCGGAGCTATCGGAGGGGCGATTATCGGCCAGCTTGGCTGCGCCATGCTTTGCTATGTAACCAGAAAAGAGCATCTGGG
GCTTCCTGACCGGGAGGATGTGAGGGAAGGCGTGGTTGCCTACAAGCTGGCGGCCCACGCCGCAGACCTGGCGAAGGGGC
ATCCATCCGCGCAATGGAGGGATAATGCTCTGGCCCAGGCCAGGTTTGAATTCCGCTGGGAGGATCAATTCAACCTTTCC
CTGGATCCGCAAAAGGCCCGTTCCTTCCATGACCTGACGCTTCCCCATGCCAACGCCAAAAAAGCCCATTTCTGTTCCAT
GTGCGGTCCGGACTTCTGCGCCATGCGCCTGAGCCAGGATATCCGCCGCCGCTCACAGCAATAG

Protein sequence :
MNDTSNLSYPGSRRIYVPGRLYPDVRVPMREIILGDTLLPDGTAHPNDPVRVYDCSGPWGDAAYEGTAEEGLPSLRAAWI
RARGDVKEDVGHERTLRAAGKTPVTQRYYAQQGVITPEMEFVAIRENLGREQAFKAIYDRYPNAKSRPDEAAEALETLTM
MPRPSELEAQEGFGPSSMVARDRLDHQHAPERRNGCRMPAYFTPEFVRDEIASGRALIPANINHPECEPMAIGRNFLVKI
NANIGNSALGSSIEEEVEKLRWAIHWGADTVMDLSTGKNIHATREWILRNSPVPIGTVPIYQALEKVGGKVADLSWEVFR
DTLLEQARQGVDYVTVHAALLLRFVNHTARRMTGIVSRGGSIMAQWSMIHEQENFLYSHWDEICSILAAYDIAVSIGDGL
RPGSVADANDFAQLAELEVQGDLTMRAWKAGVQVMNEGPGHVPMHLIRENMSKQLEWCMEAPFYTLGPLVTDIAPGYDHI
TGAIGGAIIGQLGCAMLCYVTRKEHLGLPDREDVREGVVAYKLAAHAADLAKGHPSAQWRDNALAQARFEFRWEDQFNLS
LDPQKARSFHDLTLPHANAKKAHFCSMCGPDFCAMRLSQDIRRRSQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 2e-143 58
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 2e-143 58
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 1e-142 57