Gene Information

Name : Amuc_0103 (Amuc_0103)
Accession : YP_001876729.1
Strain : Akkermansia muciniphila ATCC BAA-835
Genome accession: NC_010655
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 128218 - 128922 bp
Length : 705 bp
Strand : +
Note : PFAM: ABC transporter; SMART: AAA ATPase; KEGG: sfu:Sfum_2810 ABC transporter

DNA sequence : 
GTGATCCGCTTACGTGACATAACCAAGGTGTACCACTTGGGAGAAATAGACCTTCAAGTACTCAAGGGCATCACCCTGGA
TATCAATGAAGGGGAATTCGTCTCCCTCACGGGGGCATCCGGCTCAGGGAAATCAACCCTGATGAATATCCTGGGCTGTC
TGGACCGCCCTACCTCAGGCCATTACTATATTGCCGGGGAAGACGTTGCCAAATTCAACGCCGCAGAACGCGCCACTCTC
CGGAACAAGCGCATCGGATTCGTCTTCCAGAACTTTAACCTGCTCTCCCGTACCACAGCCCTGGAAAACGTGATGATGCC
TGCCGTATATGCCCACCCCGCCCTCAGCATGAAAGCCATGCGCGAACGTTCCGTGGAATTGCTGAATTTGGTAGGCCTTT
CCGACCGCATGGACCACACCCCGGCCCAGCTTTCCGGCGGACAGCAGCAGCGCGTAGCCATTGCCCGTTCCCTCATCAAC
AACCCCAGCATCCTGCTGGCGGACGAACCAACGGGAAACCTGGACTCCACCACTTCCAAGGAAGTGCTGCACATGTTCAA
GGACCTGAACCGCCAACAGGGAATCACAGTCATCCTGGTGACGCACGACCCCAAAATAGCCGCCTTCACGGACAGGGCCA
TCAACATGGCGGACGGCCTTATCTGCGAAGGGATTTCCGATATGCTTAGCAAGGACGACGTATGA

Protein sequence : 
MIRLRDITKVYHLGEIDLQVLKGITLDINEGEFVSLTGASGSGKSTLMNILGCLDRPTSGHYYIAGEDVAKFNAAERATL
RNKRIGFVFQNFNLLSRTTALENVMMPAVYAHPALSMKAMRERSVELLNLVGLSDRMDHTPAQLSGGQQQRVAIARSLIN
NPSILLADEPTGNLDSTTSKEVLHMFKDLNRQQGITVILVTHDPKIAAFTDRAINMADGLICEGISDMLSKDDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-33 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-33 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Amuc_0103 YP_001876729.1 ABC transporter NC_012469.1.7686878. Protein 3e-55 51
Amuc_0103 YP_001876729.1 ABC transporter NC_008702.1.4606598. Protein 7e-43 47
Amuc_0103 YP_001876729.1 ABC transporter CP001581.1.gene798.p Protein 1e-41 43
Amuc_0103 YP_001876729.1 ABC transporter NC_012469.1.7685735. Protein 2e-39 43
Amuc_0103 YP_001876729.1 ABC transporter CP001581.1.gene598.p Protein 4e-35 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Amuc_0103 YP_001876729.1 ABC transporter VFG0869 Protein 3e-24 41