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Name : gabD (BAV0968) Accession : YP_785493.1 Strain : Bordetella avium 197N Genome accession: NC_010645 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase (NADP+) Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 1040492 - 1041925 bp Length : 1434 bp Strand : - Note : - DNA sequence : ATGCACGCTTACCCAGAAATCCGCATGCTTATCGGCGGCCAGTGGCGCCGAGCCGCTGGCGACCCTGTCATCAATCCGTC TGACGGTACGGTCATCGGCTCGGTCCCCAAAGCCAGCGCTCAAGATCTCGACGATGCCATCCAGGCGGCCGCCCAAGGAT TCCGCGTCTGGAGAAAGACCGCGCCCGCCCTGCGCGCCGACATCATGTTGCGGGCCATAGCCCTGCTACGCGAACGCGTG GAGGAAATCGCCCACGCCATTTCTCTCGAACAGGGAAAGACGCTGGCCCAGAGCCAGGCCGAAGTGCTCCGTGGCTGCGA TCTGATGGCATGGGACGCCAACGAAGGCAAGCGGCTCTACGGCCGCGTCGTCCCGGCCGAGCCCGGCATGCGCCACACGG TTATCCGAGAACCCATAGGGGTCATCGCGGCCTTCACGCCCTGGAACTTCCCGATGAGTTCCCCCGCCCGGAAGGTGGGC GGCGCATTGGCCGCAGGGTGCTCGATCATTTTGAAGGCGGCCGAGGAAACGCCGGCTGGCGCCGTGCTGCTCGCCGAAGT GTTCAAAGACGCCGGGCTGCCCGACGGCGTACTCAATCTCGTGTTCGGCGATCCGGCGATGATCTCGGCGCATCTCATCG CCAATCCCACGGTGCGCGGTATCACGTTCACCGGGTCGACGCCGGTGGGCAAGCATCTGGCAGGGCTCGCGGCGCAACAC ATGAAGCCGGCCATTCTGGAACTGGGCGGTCATGCGCCCGTAGTGATTTGCGAAGACGCAGACCCGGAAAAGGCGGCGAT TGCCTGCATCAAGGGGAAGTTGAACAACGCGGGGCAGGTGTGCGTCTCACCCACGCGCTTCTTCGTCCATGATGCGGTGT ACGACGCTTTCGTCGATGCCATGCAGCGTCACGGCAGCCAGATCAAGGCAGGCAATGCAATGGACGCAGGCAACGACATC GGGCCCGTCGTCAATCGCCGCCGCTTCGACGCCATCGACGCCCTCACGAAAGATGCGCTCGCACGCGGCGCGCGCCTGGT CTGCGGCGGCAAGCCGCCTGCGGGCGCGGGATGCGTCTACCCCTTCACCGTGCTTGCCGACGTGCCCGACGATGCCCGAG CCATGAAAGAAGAACCTTTCGGCCCCCTGATCCTCATCGTGCGCGTCGCAGACATCGACGAGGCCATCGCGCGATCGAAT GCCCTGCCCTACGGGCTGGCCGGCTACGCCTTTACGACATCTGCAGCCAATGCCTACAAGCTGGGCGAGGAACTCGAGGT GGGCAACCTGGCGATCAATCACCTGGTGTCTGCCGTGTCCGAAACGCCTTTCGGCGGCGTCAAGGAAAGCGGTTACGGCC GCGAAGGCGGCACAGAAGGCCTTGAGTGCTACACGCACGTCAAGAGCATCTCCCATTTGATGGATTGGGCATAA Protein sequence : MHAYPEIRMLIGGQWRRAAGDPVINPSDGTVIGSVPKASAQDLDDAIQAAAQGFRVWRKTAPALRADIMLRAIALLRERV EEIAHAISLEQGKTLAQSQAEVLRGCDLMAWDANEGKRLYGRVVPAEPGMRHTVIREPIGVIAAFTPWNFPMSSPARKVG GALAAGCSIILKAAEETPAGAVLLAEVFKDAGLPDGVLNLVFGDPAMISAHLIANPTVRGITFTGSTPVGKHLAGLAAQH MKPAILELGGHAPVVICEDADPEKAAIACIKGKLNNAGQVCVSPTRFFVHDAVYDAFVDAMQRHGSQIKAGNAMDAGNDI GPVVNRRRFDAIDALTKDALARGARLVCGGKPPAGAGCVYPFTVLADVPDDARAMKEEPFGPLILIVRVADIDEAIARSN ALPYGLAGYAFTTSAANAYKLGEELEVGNLAINHLVSAVSETPFGGVKESGYGREGGTEGLECYTHVKSISHLMDWA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 5e-74 | 41 |
