Gene Information

Name : wbpP (BAV0512)
Accession : YP_785045.1
Strain : Bordetella avium 197N
Genome accession: NC_010645
Putative virulence/resistance : Virulence
Product : UDP-N-acetylglucosamine C4 epimerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 528626 - 529651 bp
Length : 1026 bp
Strand : +
Note : -

DNA sequence : 
ATGACGACACGCTACGACGCCGTCCGTGCGGACTTGCAGGCCCGGCCACGCAAATGGCTGGTGACGGGTTGTGCGGGGTT
TATCGGCTCCAATCTGATCGAAACCCTGCTCAAGTTGAACCAGACCGTTGTCGGTCTGGACAACTTCGCGACCGGTCATC
AGCGCAATCTTGATGAGGTGCGTGGGCTGGTGACGGCCGAGCAGTGGGCGCGGTTTACCTTCATCGAAGGCGATATCCGC
GATCTGGATACCTGCCGCCGCGCGGCCGATGGGGTGGACAAGGTGCTCCATCAGGCTGCCCTGGGTTCGGTGCCGCGTTC
GCTGAATGACCCGATCACCACCAATGCGGTGAATATCAGCGGTTTCCTGAATATGCTGGTCGCTGCGCGCGACGCCAAGG
TCGGGGCCTTTGTCTATGCGGCCTCCAGCTCGACCTATGGCGACCATCCGGCGCTGCCCAAGGTCGAAGAGAATATCGGC
CGTCCGCTGTCGCCTTACGCCGTGACCAAGTTCGTTAATGAACTTTACGCCGACGTGTTTGCGCGTTCCTATGGTTTTAC
GACCGTCGGTCTGCGTTATTTCAACGTCTTTGGCCGGCGTCAGGACCCTAATGGCGCTTATGCGGCCGTCATCCCCAAGT
GGACGGCGGCGATGATCCAGGGCGAAACCGTGGTCATCAATGGCGATGGCGAAACCAGCCGGGATTTCTGCTATGTCGAT
AATGCCGTGCAGGCCAATATTCTTGGCGCCATGGCGGGCGACGAGGCGCGCAATCAGGTCTACAACGTGGCCTATAGCGG
ACGCACCACGCTGAACCAGCTCTTTGATTTTCTGAAGACTTCGCTGGGGCGTCAGGGCGTGGCCTATGACAAACAAGCCG
AGCATGCGGATTTCCGGGCGGGTGATGTGCGTCATTCCCAGGCAGACATCAGCAAGGCGGGCAGGTTGTTGGGTTATCAG
CCGGCGTTCGACATCCTGCAAGGGCTGGACGCCGCGATGCCTTGGTACACGCAATTCCTGCGTTGA

Protein sequence : 
MTTRYDAVRADLQARPRKWLVTGCAGFIGSNLIETLLKLNQTVVGLDNFATGHQRNLDEVRGLVTAEQWARFTFIEGDIR
DLDTCRRAADGVDKVLHQAALGSVPRSLNDPITTNAVNISGFLNMLVAARDAKVGAFVYAASSSTYGDHPALPKVEENIG
RPLSPYAVTKFVNELYADVFARSYGFTTVGLRYFNVFGRRQDPNGAYAAVIPKWTAAMIQGETVVINGDGETSRDFCYVD
NAVQANILGAMAGDEARNQVYNVAYSGRTTLNQLFDFLKTSLGRQGVAYDKQAEHADFRAGDVRHSQADISKAGRLLGYQ
PAFDILQGLDAAMPWYTQFLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 1e-103 62
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 1e-103 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
wbpP YP_785045.1 UDP-N-acetylglucosamine C4 epimerase VFG0430 Protein 6e-104 62