|
Name : wbpO (BAV0511) Accession : YP_785044.1 Strain : Bordetella avium 197N Genome accession: NC_010645 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 527330 - 528604 bp Length : 1275 bp Strand : + Note : - DNA sequence : TTGCGTATTCAAGATGTGAAACTGGCCGTAGTGGGTTTGGGCTATGTCGGTCTGCCGCTGGCGGTGGAATTCGGCAAAAA GCGCTCCGTTATCGGTTTTGACATCAACACGCGCCGTATTGACGAGTTGCGAGCGGGTCGTGATCACACGCTTGAAGTCG ATGATCAGGAACTGGCCGAGGCCAAGCATCTGCGCTATACGACGGACCGCGCCGAACTGGGGCAGGCCAATGTTTTCATC GTGACGGTGCCTACCCCGATCGACGAGTACAAGCAGCCTGACCTGACCCCCCTGGTCAAAGCCAGCGAAACCATCGGCGC CGTGCTCAAGCGCGGCGATATCGTGATCTACGAATCGACCGTCTATCCGGGCGCCACGGAAGAGGATTGCGTGCCGGTGC TGGAGAAGGTTTCCGGCCTGAAGTTCAACGTTGATTTTTACGCCGGTTACAGCCCCGAGCGCATCAATCCGGGCGACAAG GCGCACCGTGTTTCCACCATCAAGAAAGTGACCTCCGGCTCGACGCCTGAGGTTGCCGAACTGGTCGATCAGCTCTACAA GGAAATCATCGTTGCCGGCACGCACAAAGCGTCCAGCATTCGCGTGGCCGAGGCCGCCAAGGTGATCGAGAACACGCAGC GCGACGTCAACATCGCCCTCATCAATGAGCTGGCCCTGATCTTCAACAAGATGGGGATCGACACGGAAGCGGTGTTGCAG GCGGCGGGGACGAAGTGGAACTTCCTGCCTTTCCGCCCGGGCCTGGTCGGCGGCCATTGCATTGGCGTGGACCCCTACTA CCTGACGCACAAAGCGCAGTCCATCGGCTACCACCCGGAAATCATTCTGGCCGGCCGTCGCTTGAACGATTCGATGGGCG GCTATGTCGTGTCGCAGCTGGTCAAGTGCATGACCAAAAAGCGTCTGCATGTTCAGGGCGCCAAGGTGCTGGTGATGGGT TTGACCTTCAAGGAAAACTGCCCTGACCTGCGCAATACGCGCGTGGTGGACATCATCCGCGAGCTGGGCGAATACAACGT CGACGTGGATGTTTACGATCCCTGGGTCGATGCCCAGGAGGCGCAGCACGAATATGGCATTACGCCGGTTGCTGAGCCGG TCGAAGGCAGCTACGACGCCGTCATTCTCGCGGTGGCGCATCACCAATTCGTCGAAATGGGCGCCGAAGCCATCCGCAAG CTGGGCAAGCCCGAGCATGTGTTGTACGACCTGAAGTATGTCCTGACCGCCCAAGAATCGGATCTGCGTCTGTAA Protein sequence : MRIQDVKLAVVGLGYVGLPLAVEFGKKRSVIGFDINTRRIDELRAGRDHTLEVDDQELAEAKHLRYTTDRAELGQANVFI VTVPTPIDEYKQPDLTPLVKASETIGAVLKRGDIVIYESTVYPGATEEDCVPVLEKVSGLKFNVDFYAGYSPERINPGDK AHRVSTIKKVTSGSTPEVAELVDQLYKEIIVAGTHKASSIRVAEAAKVIENTQRDVNIALINELALIFNKMGIDTEAVLQ AAGTKWNFLPFRPGLVGGHCIGVDPYYLTHKAQSIGYHPEIILAGRRLNDSMGGYVVSQLVKCMTKKRLHVQGAKVLVMG LTFKENCPDLRNTRVVDIIRELGEYNVDVDVYDPWVDAQEAQHEYGITPVAEPVEGSYDAVILAVAHHQFVEMGAEAIRK LGKPEHVLYDLKYVLTAQESDLRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-149 | 68 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-149 | 68 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-110 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| wbpO | YP_785044.1 | polysaccharide biosynthesis protein | VFG0431 | Protein | 8e-150 | 68 |
