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Name : kdsD (BAV3114) Accession : YP_787609.1 Strain : Bordetella avium 197N Genome accession: NC_010645 Putative virulence/resistance : Virulence Product : arabinose 5-phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 3389500 - 3390486 bp Length : 987 bp Strand : + Note : - DNA sequence : ATGACTCACCCCGTTCCCACCTCTGCTGACGCGCTGGCGTCGGCGCGCCGCACTTTGCAGACCGAGGCCCAGGCCATCAC CGAGCTGTCCGCCCGGCTGGATGGCAGCTTCACGCGCGCCGTCGACATGCTGCTGGCCTGCCAGGGGCGCGTGGTGGTCA GCGGGCTGGGCAAAACCGGCCATATCGCGCGCAAGATTGCCGCCACGCTGGCCTCGACCGGCACGCCGGCTTTCTTCATG CATGCCGCCGAAGCCGCGCATGGCGATCTCGGCATGCTGACCAGCCAGGATGTGCTGATGGCGCTTTCCTATTCCGGCTC CGGCCAGGAATTGCTGACCATTCTTCCCGTGGCCAAACGCTTGGGCGTGGGCATCATCGCCCTGACCGGCAATCCGGCAT CCGACCTGGCCTTGCAAGCCGACGTGCATCTTGACGCCAGCGTCGTCCAGGAAGCCTGTCCGCTCAATCTGGCGCCGACC GCCAGCACGACCGTCTCCCTGGCCCTGGGGGACGCCCTGGCGGTGGCCTGCCTGGAAGCCCGCGGTTTCGGTCCCGACGA CTTCGCCCGCTCGCATCCCGGCGGCGCGCTGGGCCGGCGTTTGCTGACCCATGTCCGCGATATCATGCGCCACGGCGAGG CGCTGCCCACGGTCGCCAGCACCGACAGCCTGTCCCGCGCCCTGGAAGAGATGTCCGCCAAGGGCATGGGCATGACCGCC GTCGTGGATGCGCAATTGCGCCCGGTCGGCATCTTTACCGACGGCGACCTGCGCCGCCTGATCGAACGCCTGGGCGATGT ACGCGGCCTGACCGTCGCCGAAGGCATGACGCACAACCCGCGTAGCGTGGAACCCGGCGCGCTGGCCGTAGAGGCCGCGC GCATCATGGATGAAAAACGCCTCAGCCAGATGCTGGTCATCAACGATGACGGCGTGCTGATCGGCGCCCTGCACATGCAC GATTTGATGGCTGCCAAAGTGGTATGA Protein sequence : MTHPVPTSADALASARRTLQTEAQAITELSARLDGSFTRAVDMLLACQGRVVVSGLGKTGHIARKIAATLASTGTPAFFM HAAEAAHGDLGMLTSQDVLMALSYSGSGQELLTILPVAKRLGVGIIALTGNPASDLALQADVHLDASVVQEACPLNLAPT ASTTVSLALGDALAVACLEARGFGPDDFARSHPGGALGRRLLTHVRDIMRHGEALPTVASTDSLSRALEEMSAKGMGMTA VVDAQLRPVGIFTDGDLRRLIERLGDVRGLTVAEGMTHNPRSVEPGALAVEAARIMDEKRLSQMLVINDDGVLIGALHMH DLMAAKVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 3e-58 | 45 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 2e-58 | 45 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 6e-58 | 45 |
