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Name : kdpB (BAV2702) Accession : YP_787200.1 Strain : Bordetella avium 197N Genome accession: NC_010645 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase B chain Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.12 Position : 2925170 - 2927305 bp Length : 2136 bp Strand : + Note : - DNA sequence : ATGCAAAAATCAACTGACTTGGCCAGCGGACATAGTGCGAGCGCGCTGACGCGCGATAGCCTCTGGTCTCGCAAGCTCGT CCAGACCGCCTTGCTGGACTGCCTGCGCAAACTCTCGCCCACTGCGCAATGGCGCAACCCCGTGATGTTCGTGGTCTACG TGGGCAGCATTCTGTGCACCGCCCTGTGGGTGTTGGCGCTGGCGGGACACGCTGACGCGCCAGCGGGCTTCATCTTCGCG GTGGCCTCTTGGCTGTGGTTTACCGTGCTGTTCGCCAACTTCGCCGAAGCGCTGGCCGAGGGTCGGGGCAAGCAGCAGGC CGCCACGCTGCGCGGCCTGCGCACCACCATTGAAGCACGCGCCTTGCGCAACTGGCGCGACGACGATGCCCGTCACCCCG ATGTGCAGGCCTGGCGCGAGACCGCTACGATGCGTCCGTCCGGCGATTTGCGCCGTGGCGACGTGGTGCTCATCCTGCCG GGCGACACCGTGCCCGGCGACGGCCAGGTTATCGCCGGCATTGCCTCGGTAGACGAAAGCGCCATCACCGGCGAATCGGC GCCTGTCATCCGTGAATCGGGCGGCGACTTCTGCTCCGTCACAGGCGGCACTCGCGTGCTGTCTGATTGGATCGTGGTCC GCATCGCCGCCAATCCGGGCGAGAGCTTTCTGGACCGCATGATCTCGATGGTCGAAGGCGCCAAGCGCCAGAAGACCCCT AACGAGCTGGCCCTGACCATTCTGCTGGTCGGGCTGACGCTGGTGTTCCTGCTGGTCGTGGTGACGCTGTTGCCCTTCTC GGTTTACTCGGTGAGCGCCAACGGCTCAGGCAGCGCCGTATCGGTGACCGTGCTGGTGGCCCTGCTGGTCTGCCTGATTC CGACCACGATCGGCGGCCTGCTGTCAGCCATCGGTGTGGCGGGCATGAGCCGCATGATGCAAGCCAATGTGATCGCCACC TCGGGGCGCGCGGTGGAAGCGGCCGGCGACGTGGACGTGCTGCTGCTCGACAAGACGGGCACCATCACCTTCGGCAACCG TCAGGCATCGGCTTTCAACGCCGCACCGGGCGTGGCAGAGCGCGACCTGGCTCAGGCCGCCCGCTGGGCCTCGGAGGCCG ATGAAACACCAGAAGGCCGCAGCATCGTCATGCTGGCCGAACGCCTGTTCGGCATACGCGCCGCCAACCTGGATAGCGCC GTATTCGTACCGTTTACGGCGCAAACCCGCATGAGCGGTGTTGATCTGAGCGATGGCCGCCAGGTCCGCAAGGGCGCAGT AAGCGCTATCGCCGCCTGGCTGCGGGAACAGGGCTCGGATTTGCCAAGCGCCATCGCGCGCGCCGCCGATGACATCGCTC GCCGGGGCAGCACCCCGCTGGTCGTGGCCGAGAATGGACGCGCACTGGGCGCCATCGAGCTGAAAGACATCGTCAAACCG GAAATCCAGCCGCGCTTTGCCGAACTGCGCCGCATGGGCATTAAAACCGTGATGATCACGGGCGACAACAAATTGACGGC GGCCTCCATCGCGGCCGAGGCCGGCGTCGATGACTATCTGGCCGAAGCCACGCCTGAGGCCAAACTCAAGCTGATCCGCG CCTATCAGGCCGAGGGCCGGCTGGTGGCCATGACCGGCGACGGCACAAACGATGCGCCCGCCCTGGCCCAAGCCGACGTC GCCGTCGCCATGAACTCGGGCACCCAAGCCGCCAAAGAGGCGGGCAATATGGTGGACCTGGACTCCAACCCCACCAAACT GATCGAGATCGTGGAAATCGGCAAACAGATGCTGATGACGCGCGGCGCCCTCACCACGTTCAGTATGTCCAACGACGTGG CCAAGTACTTCGCGATTATTCCGGCGGCCTTCACCAGCGTCTATCCGCAGTTGGGTCTGCTCAATTTGATGGCGCTCACG ACGCCCGCCTCGGCCATTATGTCCGCAGTGATTTTCAATGCACTCATCATCGTGCTGCTGATTCCGCTGGCCCTGCGCGG CGTGCGCTATCGCCCTCTGGGCGCGGCCACACTGCTGCGCCGCAACCTGCTTATCTACGGACTGGGCGGGCTGATCGTGC CTTTCGCCGGCATCAAGCTCATCGACATGGTGCTGGCCGCGCTCGGCTGGGTCTGA Protein sequence : MQKSTDLASGHSASALTRDSLWSRKLVQTALLDCLRKLSPTAQWRNPVMFVVYVGSILCTALWVLALAGHADAPAGFIFA VASWLWFTVLFANFAEALAEGRGKQQAATLRGLRTTIEARALRNWRDDDARHPDVQAWRETATMRPSGDLRRGDVVLILP GDTVPGDGQVIAGIASVDESAITGESAPVIRESGGDFCSVTGGTRVLSDWIVVRIAANPGESFLDRMISMVEGAKRQKTP NELALTILLVGLTLVFLLVVVTLLPFSVYSVSANGSGSAVSVTVLVALLVCLIPTTIGGLLSAIGVAGMSRMMQANVIAT SGRAVEAAGDVDVLLLDKTGTITFGNRQASAFNAAPGVAERDLAQAARWASEADETPEGRSIVMLAERLFGIRAANLDSA VFVPFTAQTRMSGVDLSDGRQVRKGAVSAIAAWLREQGSDLPSAIARAADDIARRGSTPLVVAENGRALGAIELKDIVKP EIQPRFAELRRMGIKTVMITGDNKLTAASIAAEAGVDDYLAEATPEAKLKLIRAYQAEGRLVAMTGDGTNDAPALAQADV AVAMNSGTQAAKEAGNMVDLDSNPTKLIEIVEIGKQMLMTRGALTTFSMSNDVAKYFAIIPAAFTSVYPQLGLLNLMALT TPASAIMSAVIFNALIIVLLIPLALRGVRYRPLGAATLLRRNLLIYGLGGLIVPFAGIKLIDMVLAALGWV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 3e-147 | 57 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 2e-147 | 57 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-130 | 52 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 2e-130 | 52 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-130 | 52 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-130 | 52 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-130 | 52 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 2e-130 | 52 |
