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Name : mutS (BAV2590) Accession : YP_787095.1 Strain : Bordetella avium 197N Genome accession: NC_010645 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 2798612 - 2801239 bp Length : 2628 bp Strand : + Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGAGTACAGTTGATTCGTCTTCGCACACCCCCATGATGCAGCAATACCTCCGGCTCAAAGCCGAGGCAGGTCCCTTGCT GCTGTTTTATCGCATGGGAGACTTCTATGAGATGTTCTACGAAGACGCCGAGAAAGCGGCGCGCCTGCTGAATGTCACGC TGACCAAGCGCGGCACCTCCAACGGCGCTCCCATTCCGATGGCTGGCGTGCCGGTCCACGCCATGGAGCAATACCTCGCC CGCCTCGTCGCACTGGGCGAATCGGTGGCCATCTGCGAACAGATCGGCGATCCGGCCGCCGCCAAAGGCCCGGTGGAGCG CCGTATCGTACGCATCGTCACGCCCGGCACGCTGACCGACGATGCGCTGCTGCCGGCCAAGGCAGACCGTGCGCTGGCGG CTGTCTGCCTGTCCGGCAAGCGCGATCCGCGCGCCGGCATCGCCTGGCTCAATCTGGCCAGCGGCGAATTCCATGTCACG GAATGCGCTCCCGCCCAACTGGACTCCGAACTGCATCGCATCGGCCCCGCCGAACTCGTTTATGCAGACAGCACCGAACT CGACATCACCTACTCCGGCGCACGTTCGCGGGTGCCGGATTGGCACTTCGAGGCGGATGGCGCGCGCTCGCATCTACTGA CGCACTTCCAGACCGATTCGCTGGCCGGCTTTGACATTGAAGACATGCCCGTCGCCGTGTGCGCGGCGGGCGCCTTGCTG CGCTATGCCGCCCGAACGCAATCCCAGGCACTGGCCCATGTGCAGACCATTAGCGCCGAGCGCGCCGGCATGTATGTCCT GATGGACCCCGTCACCCGGCGCAATCTGGAACTGACGCAGACATTATCCGGCGAAGAGGCCCCCACGCTATTTTCCTTGC TGGATGACTGCCGCACGCCCATGGGCAGCCGCCTGCTGCGCCGTTGGCTGCATCACCCCCTACGCGAGAATGCGCCGGTC GCGGCGCGTCAGCAGGCCATCGCCACGCTGCTCTCGGCGCGGCTGGACATGGCGCAAACTTTCGGCGCAGCCGGTCTGCT GGAAACCTTGCGATCGGCACTCGGCCTGTTCCCGGATATCGAACGCATCGCCGCGCGGCTGGCCCTGCGCTCCGTGCGTC CGCGAGAACTCGCCAGCCTGCGCGATGCGCTGGCCACGCTGCCCCAGCTACAGACGCTGGTCGCGCCTTTGAGCGCTTCG CCACGCCTGGCCGAGCTGGCCACGCAACTTACCCTGGACCCGGCCATCGCAGACCTGCTCAGCCGCGCCATTGCCCAGGA GCCGGCGCTGGCTATCCGCGACGGCGGTGTCATCGCCAGCGGTTTTGATGCAGACCTCGACGAATTGCGGCTACTGGCCG CCGACAGCGGCGAGTTTCTGGTGCAGCTCGAAGCACGAGAACGCGAGCGCACGGGCATTTCCAATCTGCGCGTTGAATTC AACCGCGTGCATGGGTTTTATATCGAAGTCAGCAAGGGTCAGACAGACAAGGTGCCTGAGGACTACCGCCGCCGTCAGAC CCTGAAAAACGCCGAGCGCTACATCACACCCGAACTCAAGAGCTGGGAGGACAAGGTGCTGTCGGCCCAGGACCGTGCGC TGGCCCGCGAGAAGTGGCTGTTCGAACAGGTGCTGGACGCACTGTCTGCCTATGTGCGCCCGCTCTCCGACGCCGCTGCG GCACTGGCCGAACTCGACGCGCTGGGCAGCCTCGCCGAACACGCACGCCGCCACGAATGGGTGGCCCCGGATCTGCTCGA AAGCGCCGAGATCGATATCGACGCGGGTCGTCATCCGGTTGTCGAACACGCCATCGAACGCTTCACGCCGAACCACTGCC GGCTCGACGCCACCCGCCGCATGTTGTTGATCACGGGCCCGAATATGGGCGGTAAATCGACCTATATGCGTCAAGTCGCC TTGATTGCGCTACTGGCGCGCACCGGCAGCTTCGTGCCGGCCCGCCGCGCCCGAGTGGGAAAAATCGACCGCATTTTCAC CCGCATCGGCGCGGCGGATGACCTGGCTGGCGGCCGCTCCACCTTCATGATGGAAATGACCGAAGCCGCCGCGATTCTGG CCGCGAGCACAAGCAACAGCCTCGTTCTGATGGATGAAATCGGCCGAGGCACCTCGACCTACGATGGCCTGGCGCTGGCC TGGGCCATCGCGCAACGCCTGATTACGCATAACCGCGCGCTTACCCTGTTCGCCACGCACTACTTTGAACTGACTCGCCT GCCCTCCGAACAAGCCACCGCCGCCAACGTGCACCTGGCCGCGGCCGAATCGGCAGGCGGCATCGTCTTTCTGCATGAGG TGCGCGAAGGCCCCGCCAGCCGCAGCTACGGTATCCAGGTGGCCCAACGCGCCGGCATTCCGGCAGCGGTCATCCGCCAC GCCACGCGTGAACTCGAACGCCTTGAAGCCCAGGGGGCGCCCACGCCTCAACTCGGGCTGTTCGCCGCCGCACTGGATGC CGAGGCCCAGACTCAGGCTCAGGCCGACCACGACGCAGAAAATGCTGCCCTGCTGGCCTTGCATGAGGCCCTGAGCGGCA TCGATCCCGACAGCCTCACTCCGCGCGAAGCGCTGGAAGCCCTTTACCGCCTGAAGGCCCTGCAATGA Protein sequence : MSTVDSSSHTPMMQQYLRLKAEAGPLLLFYRMGDFYEMFYEDAEKAARLLNVTLTKRGTSNGAPIPMAGVPVHAMEQYLA RLVALGESVAICEQIGDPAAAKGPVERRIVRIVTPGTLTDDALLPAKADRALAAVCLSGKRDPRAGIAWLNLASGEFHVT ECAPAQLDSELHRIGPAELVYADSTELDITYSGARSRVPDWHFEADGARSHLLTHFQTDSLAGFDIEDMPVAVCAAGALL RYAARTQSQALAHVQTISAERAGMYVLMDPVTRRNLELTQTLSGEEAPTLFSLLDDCRTPMGSRLLRRWLHHPLRENAPV AARQQAIATLLSARLDMAQTFGAAGLLETLRSALGLFPDIERIAARLALRSVRPRELASLRDALATLPQLQTLVAPLSAS PRLAELATQLTLDPAIADLLSRAIAQEPALAIRDGGVIASGFDADLDELRLLAADSGEFLVQLEARERERTGISNLRVEF NRVHGFYIEVSKGQTDKVPEDYRRRQTLKNAERYITPELKSWEDKVLSAQDRALAREKWLFEQVLDALSAYVRPLSDAAA ALAELDALGSLAEHARRHEWVAPDLLESAEIDIDAGRHPVVEHAIERFTPNHCRLDATRRMLLITGPNMGGKSTYMRQVA LIALLARTGSFVPARRARVGKIDRIFTRIGAADDLAGGRSTFMMEMTEAAAILAASTSNSLVLMDEIGRGTSTYDGLALA WAIAQRLITHNRALTLFATHYFELTRLPSEQATAANVHLAAAESAGGIVFLHEVREGPASRSYGIQVAQRAGIPAAVIRH ATRELERLEAQGAPTPQLGLFAAALDAEAQTQAQADHDAENAALLALHEALSGIDPDSLTPREALEALYRLKALQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 1e-164 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| mutS | YP_787095.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 52 |
